Literature DB >> 27574311

Validation and optimization of hypercapnic-calibrated fMRI from oxygen-sensitive two-photon microscopy.

Louis Gagnon1, Sava Sakadžić2, Frédéric Lesage3, Philippe Pouliot3, Anders M Dale4, Anna Devor5, Richard B Buxton6, David A Boas2.   

Abstract

Hypercapnic-calibrated fMRI allows the estimation of the relative changes in the cerebral metabolic rate of oxygen (rCMRO2) from combined BOLD and arterial spin labelling measurements during a functional task, and promises to permit more quantitative analyses of brain activity patterns. The estimation relies on a macroscopic model of the BOLD effect that balances oxygen delivery and consumption to predict haemoglobin oxygenation and the BOLD signal. The accuracy of calibrated fMRI approaches has not been firmly established, which is limiting their broader adoption. We use our recently developed microscopic vascular anatomical network model in mice as a ground truth simulator to test the accuracy of macroscopic, lumped-parameter BOLD models. In particular, we investigate the original Davis model and a more recent heuristic simplification. We find that these macroscopic models are inaccurate using the originally defined parameters, but that the accuracy can be significantly improved by redefining the model parameters to take on new values. In particular, we find that the parameter α that relates cerebral blood-volume changes to cerebral blood-flow changes is significantly smaller than typically assumed and that the optimal value changes with magnetic field strength. The results are encouraging in that they support the use of simple BOLD models to quantify BOLD signals, but further work is needed to understand the physiological interpretation of the redefined model parameters.This article is part of the themed issue 'Interpreting BOLD: a dialogue between cognitive and cellular neuroscience'.
© 2016 The Author(s).

Entities:  

Keywords:  Monte Carlo simulations; calibrated fMRI; cerebral metabolism; two-photon microscopy

Mesh:

Substances:

Year:  2016        PMID: 27574311      PMCID: PMC5003859          DOI: 10.1098/rstb.2015.0359

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  66 in total

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2.  Simulation study of brain blood flow regulation by intra-cortical arterioles in an anatomically accurate large human vascular network. Part II: flow variations induced by global or localized modifications of arteriolar diameters.

Authors:  S Lorthois; F Cassot; F Lauwers
Journal:  Neuroimage       Date:  2010-11-01       Impact factor: 6.556

3.  Quantitative BOLD: mapping of human cerebral deoxygenated blood volume and oxygen extraction fraction: default state.

Authors:  Xiang He; Dmitriy A Yablonskiy
Journal:  Magn Reson Med       Date:  2007-01       Impact factor: 4.668

4.  Nonoxidative glucose consumption during focal physiologic neural activity.

Authors:  P T Fox; M E Raichle; M A Mintun; C Dence
Journal:  Science       Date:  1988-07-22       Impact factor: 47.728

5.  Calibrating the BOLD signal during a motor task using an extended fusion model incorporating DOT, BOLD and ASL data.

Authors:  Meryem A Yücel; Theodore J Huppert; David A Boas; Louis Gagnon
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6.  Two-photon high-resolution measurement of partial pressure of oxygen in cerebral vasculature and tissue.

Authors:  Sava Sakadzić; Emmanuel Roussakis; Mohammad A Yaseen; Emiri T Mandeville; Vivek J Srinivasan; Ken Arai; Svetlana Ruvinskaya; Anna Devor; Eng H Lo; Sergei A Vinogradov; David A Boas
Journal:  Nat Methods       Date:  2010-08-08       Impact factor: 28.547

7.  Absolute quantification of resting oxygen metabolism and metabolic reactivity during functional activation using QUO2 MRI.

Authors:  C J Gauthier; L Desjardins-Crépeau; C Madjar; L Bherer; R D Hoge
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8.  Estimating cerebral oxygen metabolism from fMRI with a dynamic multicompartment Windkessel model.

Authors:  Theodore J Huppert; Monica S Allen; Solomon G Diamond; David A Boas
Journal:  Hum Brain Mapp       Date:  2009-05       Impact factor: 5.038

9.  Sensitivity of neural-hemodynamic coupling to alterations in cerebral blood flow during hypercapnia.

Authors:  Theodore J Huppert; Phill B Jones; Anna Devor; Andrew K Dunn; Ivan C Teng; Anders M Dale; David A Boas
Journal:  J Biomed Opt       Date:  2009 Jul-Aug       Impact factor: 3.170

10.  A New Functional MRI Approach for Investigating Modulations of Brain Oxygen Metabolism.

Authors:  Valerie E M Griffeth; Nicholas P Blockley; Aaron B Simon; Richard B Buxton
Journal:  PLoS One       Date:  2013-06-27       Impact factor: 3.240

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  11 in total

1.  Characterizing white matter fiber orientation effects on multi-parametric quantitative BOLD assessment of oxygen extraction fraction.

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2.  Interpreting BOLD: towards a dialogue between cognitive and cellular neuroscience.

Authors:  Catherine N Hall; Clare Howarth; Zebulun Kurth-Nelson; Anusha Mishra
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-10-05       Impact factor: 6.237

3.  Awake Mouse Imaging: From Two-Photon Microscopy to Blood Oxygen Level-Dependent Functional Magnetic Resonance Imaging.

Authors:  Michèle Desjardins; Kıvılcım Kılıç; Martin Thunemann; Celine Mateo; Dominic Holland; Christopher G L Ferri; Jonathan A Cremonesi; Baoqiang Li; Qun Cheng; Kimberly L Weldy; Payam A Saisan; David Kleinfeld; Takaki Komiyama; Thomas T Liu; Robert Bussell; Eric C Wong; Miriam Scadeng; Andrew K Dunn; David A Boas; Sava Sakadžić; Joseph B Mandeville; Richard B Buxton; Anders M Dale; Anna Devor
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2018-12-12

4.  Dependence of the MR signal on the magnetic susceptibility of blood studied with models based on real microvascular networks.

Authors:  Xiaojun Cheng; Avery J L Berman; Jonathan R Polimeni; Richard B Buxton; Louis Gagnon; Anna Devor; Sava Sakadžić; David A Boas
Journal:  Magn Reson Med       Date:  2019-01-18       Impact factor: 4.668

5.  The potential for gas-free measurements of absolute oxygen metabolism during both baseline and activation states in the human brain.

Authors:  Eulanca Y Liu; Jia Guo; Aaron B Simon; Frank Haist; David J Dubowitz; Richard B Buxton
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6.  Dependence of resting-state fMRI fluctuation amplitudes on cerebral cortical orientation relative to the direction of B0 and anatomical axes.

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7.  Non-neural factors influencing BOLD response magnitudes within individual subjects.

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Review 8.  The roadmap for estimation of cell-type-specific neuronal activity from non-invasive measurements.

Authors:  Hana Uhlirova; Kıvılcım Kılıç; Peifang Tian; Sava Sakadžić; Louis Gagnon; Martin Thunemann; Michèle Desjardins; Payam A Saisan; Krystal Nizar; Mohammad A Yaseen; Donald J Hagler; Matthieu Vandenberghe; Srdjan Djurovic; Ole A Andreassen; Gabriel A Silva; Eliezer Masliah; David Kleinfeld; Sergei Vinogradov; Richard B Buxton; Gaute T Einevoll; David A Boas; Anders M Dale; Anna Devor
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-10-05       Impact factor: 6.237

9.  High-Resolution CBV-fMRI Allows Mapping of Laminar Activity and Connectivity of Cortical Input and Output in Human M1.

Authors:  Laurentius Huber; Daniel A Handwerker; David C Jangraw; Gang Chen; Andrew Hall; Carsten Stüber; Javier Gonzalez-Castillo; Dimo Ivanov; Sean Marrett; Maria Guidi; Jozien Goense; Benedikt A Poser; Peter A Bandettini
Journal:  Neuron       Date:  2017-12-07       Impact factor: 17.173

Review 10.  Imaging faster neural dynamics with fast fMRI: A need for updated models of the hemodynamic response.

Authors:  Jonathan R Polimeni; Laura D Lewis
Journal:  Prog Neurobiol       Date:  2021-09-12       Impact factor: 11.685

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