Literature DB >> 27574309

The roadmap for estimation of cell-type-specific neuronal activity from non-invasive measurements.

Hana Uhlirova1, Kıvılcım Kılıç2, Peifang Tian3, Sava Sakadžić4, Louis Gagnon4, Martin Thunemann5, Michèle Desjardins5, Payam A Saisan2, Krystal Nizar6, Mohammad A Yaseen4, Donald J Hagler5, Matthieu Vandenberghe7, Srdjan Djurovic8, Ole A Andreassen9, Gabriel A Silva10, Eliezer Masliah2, David Kleinfeld11, Sergei Vinogradov12, Richard B Buxton5, Gaute T Einevoll13, David A Boas4, Anders M Dale14, Anna Devor15.   

Abstract

The computational properties of the human brain arise from an intricate interplay between billions of neurons connected in complex networks. However, our ability to study these networks in healthy human brain is limited by the necessity to use non-invasive technologies. This is in contrast to animal models where a rich, detailed view of cellular-level brain function with cell-type-specific molecular identity has become available due to recent advances in microscopic optical imaging and genetics. Thus, a central challenge facing neuroscience today is leveraging these mechanistic insights from animal studies to accurately draw physiological inferences from non-invasive signals in humans. On the essential path towards this goal is the development of a detailed 'bottom-up' forward model bridging neuronal activity at the level of cell-type-specific populations to non-invasive imaging signals. The general idea is that specific neuronal cell types have identifiable signatures in the way they drive changes in cerebral blood flow, cerebral metabolic rate of O2 (measurable with quantitative functional Magnetic Resonance Imaging), and electrical currents/potentials (measurable with magneto/electroencephalography). This forward model would then provide the 'ground truth' for the development of new tools for tackling the inverse problem-estimation of neuronal activity from multimodal non-invasive imaging data.This article is part of the themed issue 'Interpreting BOLD: a dialogue between cognitive and cellular neuroscience'.
© 2016 The Author(s).

Entities:  

Keywords:  BOLD fMRI; CMRO2; cerebral blood flow; magnetoencephalography; neurometabolic; neurovascular

Mesh:

Substances:

Year:  2016        PMID: 27574309      PMCID: PMC5003857          DOI: 10.1098/rstb.2015.0356

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  162 in total

1.  Evidence of a cerebrovascular postarteriole windkessel with delayed compliance.

Authors:  J B Mandeville; J J Marota; C Ayata; G Zaharchuk; M A Moskowitz; B R Rosen; R M Weisskoff
Journal:  J Cereb Blood Flow Metab       Date:  1999-06       Impact factor: 6.200

Review 2.  Conducted vasomotor responses in arterioles: characteristics, mechanisms and physiological significance.

Authors:  F Gustafsson; N Holstein-Rathlou
Journal:  Acta Physiol Scand       Date:  1999-09

3.  Increased cortical oxidative metabolism due to sensory stimulation: implications for functional brain imaging.

Authors:  I Vanzetta; A Grinvald
Journal:  Science       Date:  1999-11-19       Impact factor: 47.728

4.  Dynamic statistical parametric mapping: combining fMRI and MEG for high-resolution imaging of cortical activity.

Authors:  A M Dale; A K Liu; B R Fischl; R L Buckner; J W Belliveau; J D Lewine; E Halgren
Journal:  Neuron       Date:  2000-04       Impact factor: 17.173

5.  Modeling advection and diffusion of oxygen in complex vascular networks.

Authors:  D A Beard; J B Bassingthwaighte
Journal:  Ann Biomed Eng       Date:  2001-04       Impact factor: 3.934

6.  A neuronal morphologic type unique to humans and great apes.

Authors:  E A Nimchinsky; E Gilissen; J M Allman; D P Perl; J M Erwin; P R Hof
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

7.  Calcium electrogenesis in distal apical dendrites of layer 5 pyramidal cells at a critical frequency of back-propagating action potentials.

Authors:  M E Larkum; K M Kaiser; B Sakmann
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-07       Impact factor: 11.205

8.  Distribution of oxygen tension on the surface of arterioles, capillaries and venules of brain cortex and in tissue in normoxia: an experimental study on rats.

Authors:  E Vovenko
Journal:  Pflugers Arch       Date:  1999-03       Impact factor: 3.657

9.  Dynamic changes in cerebral blood flow, O2 tension, and calculated cerebral metabolic rate of O2 during functional activation using oxygen phosphorescence quenching.

Authors:  B M Ances; D F Wilson; J H Greenberg; J A Detre
Journal:  J Cereb Blood Flow Metab       Date:  2001-05       Impact factor: 6.200

Review 10.  Cellular mechanisms of brain energy metabolism and their relevance to functional brain imaging.

Authors:  P J Magistretti; L Pellerin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1999-07-29       Impact factor: 6.237

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  21 in total

1.  Interpreting BOLD: towards a dialogue between cognitive and cellular neuroscience.

Authors:  Catherine N Hall; Clare Howarth; Zebulun Kurth-Nelson; Anusha Mishra
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-10-05       Impact factor: 6.237

Review 2.  The Neurovascular Unit Coming of Age: A Journey through Neurovascular Coupling in Health and Disease.

Authors:  Costantino Iadecola
Journal:  Neuron       Date:  2017-09-27       Impact factor: 17.173

3.  Awake Mouse Imaging: From Two-Photon Microscopy to Blood Oxygen Level-Dependent Functional Magnetic Resonance Imaging.

Authors:  Michèle Desjardins; Kıvılcım Kılıç; Martin Thunemann; Celine Mateo; Dominic Holland; Christopher G L Ferri; Jonathan A Cremonesi; Baoqiang Li; Qun Cheng; Kimberly L Weldy; Payam A Saisan; David Kleinfeld; Takaki Komiyama; Thomas T Liu; Robert Bussell; Eric C Wong; Miriam Scadeng; Andrew K Dunn; David A Boas; Sava Sakadžić; Joseph B Mandeville; Richard B Buxton; Anders M Dale; Anna Devor
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2018-12-12

4.  Opposed hemodynamic responses following increased excitation and parvalbumin-based inhibition.

Authors:  Joonhyuk Lee; Chloe L Stile; Annie R Bice; Zachary P Rosenthal; Ping Yan; Abraham Z Snyder; Jin-Moo Lee; Adam Q Bauer
Journal:  J Cereb Blood Flow Metab       Date:  2020-06-17       Impact factor: 6.200

5.  The potential for gas-free measurements of absolute oxygen metabolism during both baseline and activation states in the human brain.

Authors:  Eulanca Y Liu; Jia Guo; Aaron B Simon; Frank Haist; David J Dubowitz; Richard B Buxton
Journal:  Neuroimage       Date:  2019-11-10       Impact factor: 6.556

6.  Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo.

Authors:  Hana Uhlirova; Peifang Tian; Kıvılcım Kılıç; Martin Thunemann; Vishnu B Sridhar; Radim Chmelik; Hauke Bartsch; Anders M Dale; Anna Devor; Payam A Saisan
Journal:  J Vis Exp       Date:  2018-05-04       Impact factor: 1.355

7.  More homogeneous capillary flow and oxygenation in deeper cortical layers correlate with increased oxygen extraction.

Authors:  Baoqiang Li; Tatiana V Esipova; Ikbal Sencan; Kıvılcım Kılıç; Buyin Fu; Michele Desjardins; Mohammad Moeini; Sreekanth Kura; Mohammad A Yaseen; Frederic Lesage; Leif Østergaard; Anna Devor; David A Boas; Sergei A Vinogradov; Sava Sakadžić
Journal:  Elife       Date:  2019-07-15       Impact factor: 8.140

Review 8.  Vascular and neural basis of the BOLD signal.

Authors:  Patrick J Drew
Journal:  Curr Opin Neurobiol       Date:  2019-07-21       Impact factor: 6.627

9.  nNOS-expressing interneurons control basal and behaviorally evoked arterial dilation in somatosensory cortex of mice.

Authors:  Christina T Echagarruga; Kyle W Gheres; Jordan N Norwood; Patrick J Drew
Journal:  Elife       Date:  2020-10-05       Impact factor: 8.140

10.  Optical measurement of microvascular oxygenation and blood flow responses in awake mouse cortex during functional activation.

Authors:  İkbal Şencan; Tatiana Esipova; Kıvılcım Kılıç; Baoqiang Li; Michèle Desjardins; Mohammad A Yaseen; Hui Wang; Jason E Porter; Sreekanth Kura; Buyin Fu; Timothy W Secomb; David A Boas; Sergei A Vinogradov; Anna Devor; Sava Sakadžić
Journal:  J Cereb Blood Flow Metab       Date:  2020-06-09       Impact factor: 6.200

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