Literature DB >> 27570789

RNA therapeutics: RNAi and antisense mechanisms and clinical applications.

Jessica Chery1.   

Abstract

RNA therapeutics refers to the use of oligonucleotides to target primarily ribonucleic acids (RNA) for therapeutic efforts or in research studies to elucidate functions of genes. Oligonucleotides are distinct from other pharmacological modalities, such as small molecules and antibodies that target mainly proteins, due to their mechanisms of action and chemical properties. Nucleic acids come in two forms: deoxyribonucleic acids (DNA) and ribonucleic acids (RNA). Although DNA is more stable, RNA offers more structural variety ranging from messenger RNA (mRNA) that codes for protein to non-coding RNAs, microRNA (miRNA), transfer RNA (tRNA), short interfering RNAs (siRNAs), ribosomal RNA (rRNA), and long-noncoding RNAs (lncRNAs). As our understanding of the wide variety of RNAs deepens, researchers have sought to target RNA since >80% of the genome is estimated to be transcribed. These transcripts include non-coding RNAs such as miRNAs and siRNAs that function in gene regulation by playing key roles in the transfer of genetic information from DNA to protein, the final product of the central dogma in biology1. Currently there are two main approaches used to target RNA: double stranded RNA-mediated interference (RNAi) and antisense oligonucleotides (ASO). Both approaches are currently in clinical trials for targeting of RNAs involved in various diseases, such as cancer and neurodegeneration. In fact, ASOs targeting spinal muscular atrophy and amyotrophic lateral sclerosis have shown positive results in clinical trials2. Advantages of ASOs include higher affinity due to the development of chemical modifications that increase affinity, selectivity while decreasing toxicity due to off-target effects. This review will highlight the major therapeutic approaches of RNA medicine currently being applied with a focus on RNAi and ASOs.

Entities:  

Keywords:  Antisense oligonucleotides (ASOs); Locked Nucleic Acids (LNAs); RNA therapeutics; siRNAs

Year:  2016        PMID: 27570789      PMCID: PMC4995773          DOI: 10.14304/surya.jpr.v4n7.5

Source DB:  PubMed          Journal:  Postdoc J        ISSN: 2328-9791


  65 in total

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Journal:  Nature       Date:  2000-03-16       Impact factor: 49.962

2.  Many commonly used siRNAs risk off-target activity.

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Journal:  Biochem Biophys Res Commun       Date:  2004-06-18       Impact factor: 3.575

Review 3.  MicroRNAs: small RNAs with a big role in gene regulation.

Authors:  Lin He; Gregory J Hannon
Journal:  Nat Rev Genet       Date:  2004-07       Impact factor: 53.242

Review 4.  Pharmacokinetics, biodistribution and cell uptake of antisense oligonucleotides.

Authors:  Richard S Geary; Daniel Norris; Rosie Yu; C Frank Bennett
Journal:  Adv Drug Deliv Rev       Date:  2015-02-07       Impact factor: 15.470

5.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

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Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

6.  Therapeutic silencing of an endogenous gene by systemic administration of modified siRNAs.

Authors:  Jürgen Soutschek; Akin Akinc; Birgit Bramlage; Klaus Charisse; Rainer Constien; Mary Donoghue; Sayda Elbashir; Anke Geick; Philipp Hadwiger; Jens Harborth; Matthias John; Venkitasamy Kesavan; Gary Lavine; Rajendra K Pandey; Timothy Racie; Kallanthottathil G Rajeev; Ingo Röhl; Ivanka Toudjarska; Gang Wang; Silvio Wuschko; David Bumcrot; Victor Koteliansky; Stefan Limmer; Muthiah Manoharan; Hans-Peter Vornlocher
Journal:  Nature       Date:  2004-11-11       Impact factor: 49.962

7.  Mammalian microRNAs predominantly act to decrease target mRNA levels.

Authors:  Huili Guo; Nicholas T Ingolia; Jonathan S Weissman; David P Bartel
Journal:  Nature       Date:  2010-08-12       Impact factor: 49.962

Review 8.  Biological activity and biotechnological aspects of locked nucleic acids.

Authors:  Karin E Lundin; Torben Højland; Bo R Hansen; Robert Persson; Jesper B Bramsen; Jørgen Kjems; Troels Koch; Jesper Wengel; C I Edvard Smith
Journal:  Adv Genet       Date:  2013       Impact factor: 1.944

Review 9.  Current prospects for RNA interference-based therapies.

Authors:  Beverly L Davidson; Paul B McCray
Journal:  Nat Rev Genet       Date:  2011-05       Impact factor: 53.242

10.  The rates of the major steps in the molecular mechanism of RNase H1-dependent antisense oligonucleotide induced degradation of RNA.

Authors:  Timothy A Vickers; Stanley T Crooke
Journal:  Nucleic Acids Res       Date:  2015-09-17       Impact factor: 16.971

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  45 in total

Review 1.  Long non-coding RNA: a versatile regulator of the nuclear factor-κB signalling circuit.

Authors:  Xiaohua Mao; Zhenyi Su; Adnan K Mookhtiar
Journal:  Immunology       Date:  2017-01-19       Impact factor: 7.397

2.  Oligonucleotide-targeting periostin ameliorates pulmonary fibrosis.

Authors:  A Tomaru; T Kobayashi; J A Hinneh; P Baffour Tonto; C N D'Alessandro-Gabazza; H Fujimoto; K Fujiwara; Y Takahashi; M Ohnishi; T Yasuma; K Nishihama; M Yoshino; K Takao; M Toda; T Totoki; Y Takei; K Yoshikawa; O Taguchi; E C Gabazza
Journal:  Gene Ther       Date:  2017-08-18       Impact factor: 5.250

3.  Toward new design principles for superior gene silencing.

Authors:  Rangaramanujam M Kannan
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-16       Impact factor: 11.205

Review 4.  Translation of MicroRNA-Based Huntingtin-Lowering Therapies from Preclinical Studies to the Clinic.

Authors:  Jana Miniarikova; Melvin M Evers; Pavlina Konstantinova
Journal:  Mol Ther       Date:  2018-02-08       Impact factor: 11.454

Review 5.  Beyond GalNAc! Drug delivery systems comprising complex oligosaccharides for targeted use of nucleic acid therapeutics.

Authors:  Joseph O'Sullivan; Jose Muñoz-Muñoz; Graeme Turnbull; Neil Sim; Stuart Penny; Sterghios Moschos
Journal:  RSC Adv       Date:  2022-07-14       Impact factor: 4.036

Review 6.  Cerebral Organoids and Antisense Oligonucleotide Therapeutics: Challenges and Opportunities.

Authors:  Jenny Lange; Haiyan Zhou; Amy McTague
Journal:  Front Mol Neurosci       Date:  2022-06-27       Impact factor: 6.261

Review 7.  RNA-based diagnostic and therapeutic strategies for cardiovascular disease.

Authors:  Dongchao Lu; Thomas Thum
Journal:  Nat Rev Cardiol       Date:  2019-06-11       Impact factor: 32.419

8.  Functional characterization of Terminal Flower1 homolog in Cornus canadensis by genetic transformation.

Authors:  Xiang Liu; Jian Zhang; Deyu Xie; Robert G Franks; Qiu-Yun Jenny Xiang
Journal:  Plant Cell Rep       Date:  2019-01-07       Impact factor: 4.570

9.  Deep learning to design nuclear-targeting abiotic miniproteins.

Authors:  Carly K Schissel; Somesh Mohapatra; Justin M Wolfe; Colin M Fadzen; Kamela Bellovoda; Chia-Ling Wu; Jenna A Wood; Annika B Malmberg; Andrei Loas; Rafael Gómez-Bombarelli; Bradley L Pentelute
Journal:  Nat Chem       Date:  2021-08-09       Impact factor: 24.427

Review 10.  A review of the underlying genetics and emerging therapies for canine cardiomyopathies.

Authors:  L Shen; A H Estrada; K M Meurs; M Sleeper; C Vulpe; C J Martyniuk; C A Pacak
Journal:  J Vet Cardiol       Date:  2021-05-21       Impact factor: 1.750

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