| Literature DB >> 27566956 |
Rita Hamad1, Shripad Tuljapurkar2, David H Rehkopf3.
Abstract
BACKGROUND: Shorter telomere length (TL) has been associated with stress and adverse socioeconomic conditions, yet U.S. blacks have longer TL than whites. The role of genetic versus environmental factors in explaining TL by race and socioeconomic position (SEP) remains unclear.Entities:
Keywords: Polygenic risk score; Race; Single nucleotide polymorphism; Socioeconomic position; Telomere; Telomere length
Mesh:
Substances:
Year: 2016 PMID: 27566956 PMCID: PMC5049995 DOI: 10.1016/j.ebiom.2016.08.015
Source DB: PubMed Journal: EBioMedicine ISSN: 2352-3964 Impact factor: 8.143
Sample characteristics (N = 11,934).
| Variable | Value |
|---|---|
| Sociodemographic characteristics | |
| Race (%) | |
| White | 75.7 |
| Black | 13.4 |
| Hispanic | 9.3 |
| Other | 1.6 |
| Age at genetic testing (mean ± SD) | 68.0 ± 10.6 |
| Female (%) | 59.2 |
| Educational attainment (%) | |
| Less than high school | 19.9 |
| High school | 35.7 |
| Some college | 22.7 |
| College or more | 21.8 |
| Total assets in USD (mean ± SD) | 500,579 ± 1,199,420 |
| Genetic characteristics | |
| Polygenic risk score, standardized | |
| No. observations | 11,143 |
| Mean ± SD | 0.002 ± 1.00 |
| Telomere length in base pairs | |
| No. observations | 5808 |
| Mean ± SD | 3314 ± 1749 |
Bivariate (unadjusted) correlations of TL-associated polygenic risk score with race, socioeconomic position, and genetic structure (N = 11,143).
| Variable | β coefficient [95% CI] | R-squared |
|---|---|---|
| Race (ref: white) | ||
| Black | − 0.92 | 0.110 |
| Hispanic | 0.24 | |
| Other | 0.20 | |
| Age | − 0.0013 [− 0.0031, 0.00055] | 0.000 |
| Female | 0.016 [− 0.020, 0.053] | 0.000 |
| Education (ref: less than HS) | ||
| High school | 0.061 | 0.001 |
| Some college | 0.083 | |
| College or more | 0.11 | |
| Assets z-score | 0.042 | 0.002 |
| Genetic structure | ||
| Component 1 | − 9.14 | 0.125 |
| Component 2 | − 11.7 | |
| Component 3 | 3.07 | |
| Component 4 | 5.66 |
TL = telomere length.
p < 0.01.
p < 0.05.
Multivariable correlations of TL-associated polygenic risk score with race, socioeconomic position, and genetic structure.
| Variable | β coefficient [95% CI] | |
|---|---|---|
| A: Base model | B: Controlling for genetic structure | |
| Race (ref: white) | ||
| Black | − 0.92 | 0.0066 [− 0.24, 0.25] |
| Hispanic | 0.23 | − 0.080 [− 0.20, 0.040] |
| Other | 0.19 | 0.0042 [− 0.21, 0.22] |
| Age | − 0.0019 | − 0.0015 [− 0.0033, 0.00020] |
| Female | 0.040 | 0.036 |
| Education (ref: less than HS) | ||
| High school | − 0.017 [− 0.068, 0.034] | − 0.0087 [− 0.059, 0.041] |
| Some college | 0.011 [− 0.045, 0.067] | 0.017 [− 0.039, 0.072] |
| College or more | − 0.0030 [− 0.061, 0.055] | 0.0058 [− 0.052, 0.064] |
| Assets z-score | 0.013 [− 0.0028, 0.028] | 0.012 [− 0.0027, 0.028] |
| Genetic structure | ||
| Component 1 | − 9.19 | |
| Component 2 | − 12.9 | |
| Component 3 | 4.86 | |
| Component 4 | 4.83 | |
| Constant | 0.21 | 0.089 [− 0.048, 0.23] |
| Observations | 11,141 | 11,141 |
| R-squared | 0.111 | 0.126 |
TL = telomere length.
p < 0.01.
p < 0.05.
Bivariate (unadjusted) correlations of telomere length with race, socioeconomic position, and genetic structure (N = 5808).
| Variable | β coefficient [95% CI] | R-squared |
|---|---|---|
| Race (ref: white) | ||
| Black | 535 | 0.011 |
| Hispanic | 157 | |
| Other | 122 [− 184, 428] | |
| Age | − 8.77 | 0.003 |
| Female | 25.8 [− 67.7, 119] | 0.000 |
| Education (ref: less than HS) | ||
| High school | − 117 [− 267, 31.8] | 0.001 |
| Some college | − 57.0 [− 205, 91.2] | |
| College or more | − 148 | |
| Assets z-score | − 35.4 | 0.001 |
| Genetic structure | ||
| Component 1 | 4984 | 0.016 |
| Component 2 | − 2974 | |
| Component 3 | 1374 [− 6283, 9030] | |
| Component 4 | − 3297 [− 8397, 1803] |
p < 0.01.
p < 0.05.
Multivariable correlations of telomere length with race, socioeconomic position, and genetic structure.
| Variable | β coefficient [95% CI] | |
|---|---|---|
| A: Base model | B: Controlling for genetic structure | |
| Race (ref: white) | ||
| Black | 501 | 163 [− 224, 551] |
| Hispanic | 97.2 [− 47.7, 242] | − 139 [− 291, 12.1] |
| Other | 87.9 [− 220, 396] | − 162 [− 430, 107] |
| Age | − 7.58 | − 9.14 |
| Female | − 1.91 [− 97.1, 93.3] | 46.9 [− 30.4, 124] |
| Education (ref: less than HS) | ||
| High school | − 58.6 [− 223, 106] | 64.4 [− 57.3, 186] |
| Some college | − 13.9 [− 171, 143] | 73.2 [− 30.4, 177] |
| College or more | − 78.4 [− 227, 70.4] | 42.7 [− 56.6, 142] |
| Assets z-score | − 11.4 [− 27.8, 5.00] | − 6.74 [− 23.7, 10.3] |
| Genetic structure | ||
| Component 1 | 3308 [− 403, 7019] | |
| Component 2 | − 5885 | |
| Component 3 | 1709 [− 6824, 10,242] | |
| Component 4 | − 6064 | |
| Constant | 8.23 | 3801 |
| Observations | 5806 | 5673 |
| R-squared | 0.013 | 0.021 |
p < 0.01.
p < 0.05.
Association of telomere length with polygenic risk score and individual SNPs, by race.
| Race | β coefficient [95% CI] | |||||||
|---|---|---|---|---|---|---|---|---|
| PRS | ||||||||
| Whites ( | − 29.5 [− 98.0, 39.0] | 20.2 [− 45.6, 86.1] | − 46.2 [− 102, 9.53] | − 23.0 [− 80.9, 35.0] | − 137 | − 13.2 [− 88.4, 62.0] | 9.46 [− 58.9, 77.8] | − 30.0 [− 91.5, 31.4] |
| Blacks ( | 143 [− 156, 442] | − 359 | − 102 [− 288, 84.3] | 249 [− 407, 905] | 45.7 [− 112, 204] | 140 [− 259, 539] | 212 [− 44.6, 469] | 177 [− 159, 513] |
| Hispanics ( | − 9.51 [− 81.1, 62.0] | 24.0 [− 93.0, 141] | − 11.3 [− 155, 133] | − 60.1 [− 185, 64.4] | 109 [− 47.3, 265] | 26.0 [− 158, 210] | − 40.7 [− 183, 102] | − 33.5 [− 196, 129] |
SNP = single nucleotide polymorphism. Individuals of “other” race not included due to small sample size (N = 81). Principal components not included in this analysis.
p < 0.05.
p < 0.1.