Literature DB >> 27564000

Discrete Step Sizes of Molecular Motors Lead to Bimodal Non-Gaussian Velocity Distributions under Force.

Huong T Vu1, Shaon Chakrabarti1, Michael Hinczewski2, D Thirumalai1.   

Abstract

Fluctuations in the physical properties of biological machines are inextricably linked to their functions. Distributions of run lengths and velocities of processive molecular motors, like kinesin-1, are accessible through single-molecule techniques, but rigorous theoretical models for these probabilities are lacking. Here, we derive exact analytic results for a kinetic model to predict the resistive force (F)-dependent velocity [P(v)] and run length [P(n)] distribution functions of generic finitely processive molecular motors. Our theory quantitatively explains the zero force kinesin-1 data for both P(n) and P(v) using the detachment rate as the only parameter. In addition, we predict the F dependence of these quantities. At nonzero F, P(v) is non-Gaussian and is bimodal with peaks at positive and negative values of v, which is due to the discrete step size of kinesin-1. Although the predictions are based on analyses of kinesin-1 data, our results are general and should hold for any processive motor, which walks on a track by taking discrete steps.

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Year:  2016        PMID: 27564000     DOI: 10.1103/PhysRevLett.117.078101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  5 in total

1.  Processivity, Velocity, and Universal Characteristics of Nucleic Acid Unwinding by Helicases.

Authors:  Shaon Chakrabarti; Christopher Jarzynski; D Thirumalai
Journal:  Biophys J       Date:  2019-07-20       Impact factor: 4.033

2.  Processivity and Velocity for Motors Stepping on Periodic Tracks.

Authors:  Mauro L Mugnai; Matthew A Caporizzo; Yale E Goldman; D Thirumalai
Journal:  Biophys J       Date:  2020-02-25       Impact factor: 4.033

3.  How kinesin waits for ATP affects the nucleotide and load dependence of the stepping kinetics.

Authors:  Ryota Takaki; Mauro L Mugnai; Yonathan Goldtzvik; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-28       Impact factor: 11.205

4.  Modeling processive motion of kinesin-13 MCAK and kinesin-14 Cik1-Kar3 molecular motors.

Authors:  Ping Xie
Journal:  Protein Sci       Date:  2021-08-20       Impact factor: 6.993

5.  Run length distribution of dimerized kinesin-3 molecular motors: comparison with dimeric kinesin-1.

Authors:  Si-Kao Guo; Xiao-Xuan Shi; Peng-Ye Wang; Ping Xie
Journal:  Sci Rep       Date:  2019-11-18       Impact factor: 4.379

  5 in total

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