Literature DB >> 27563039

Complete Genome Sequence of Neisseria weaveri Strain NCTC13585.

Sarah Alexander1, Mohammed-Abbas Fazal2, Edward Burnett2, Ana Deheer-Graham2, Karen Oliver3, Nancy Holroyd3, Julian Parkhill3, Julie E Russell2.   

Abstract

Neisseria weaveri is a commensal organism of the canine oral cavity and an occasional opportunistic human pathogen which is associated with dog bite wounds. Here we report the first complete genomic sequence of the N. weaveri NCTC13585 (CCUG30381) strain, which was originally isolated from a patient with a canine bite wound.
Copyright © 2016 Alexander et al.

Entities:  

Year:  2016        PMID: 27563039      PMCID: PMC5000823          DOI: 10.1128/genomeA.00815-16

Source DB:  PubMed          Journal:  Genome Announc


GENOME ANNOUNCEMENT

Neisseria weaveri is a Gram-negative, nonmotile, aerobic, rod-like bacterium that is a commensal of the canine oral flora (1–3). It is an infrequent opportunistic pathogen of dog bite wounds and there are also isolated reports of N. weaveri causing lower respiratory tract and septic infection (4, 5). There is a paucity of information on N. weaveri within the literature and historically there has been confusion with its taxonomy, with two different type strains being described (1–3). To date there are only two draft genomes available for N. weaveri, LMG 5135 and ATCC 51223 (both the proposed type strains), which have been assembled into 46 and 40 contigs, respectively (6, 7). Here we report the first complete genome for N. weaveri strain NCTC13585, which was isolated from a human dog bite wound in Danderyd, Sweden, in 1982. High-molecular-weight genomic DNA was extracted from a pure culture using the Masterpure DNA extraction kit (Epicentre, WI, USA) and the quality was confirmed (>50 kb) using the Agilent 2200 TapeStation. Whole-genome sequencing (WGS) was performed using the PacBio single-molecule real-time (SMRT) DNA sequencing technology utilizing C4/P6 chemistry followed by genome assembly using an automated assembly pipeline and annotation with Prokka. The genomic size of NCTC13585 was determined to be 2,188,497 bp. The average G+C content of the sequence was 49.0%. No plasmids were identified in this strain. In total there were 2,060 coding sequences, four rRNA operons, and 55 tRNA genes identified.

Accession number(s).

The complete genome sequence has been deposited in the European Nucleotide Archive under the BioSample accession number SAMEA3174300 and the assembly accession number LT571436.
  7 in total

1.  Isolation of CDC group M-5 and Staphylococcus intermedius from infected dog bites.

Authors:  M Barnham; B Holmes
Journal:  J Infect       Date:  1992-11       Impact factor: 6.072

2.  Septicemia caused by Neisseria weaveri.

Authors:  P Carlson; S Kontiainen; P Anttila; E Eerola
Journal:  Clin Infect Dis       Date:  1997-04       Impact factor: 9.079

3.  Comparative genomics of Neisseria weaveri clarifies the taxonomy of this species and identifies genetic determinants that may be associated with virulence.

Authors:  Hana Yi; Yong-Joon Cho; Seok-Hwan Yoon; Sang-Cheol Park; Jongsik Chun
Journal:  FEMS Microbiol Lett       Date:  2012-01-06       Impact factor: 2.742

4.  Neisseria weaveri Andersen et al. 1993 is a later heterotypic synonym of Neisseria weaveri Holmes et al. 1993.

Authors:  Hana Yi; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2014-11-11       Impact factor: 2.747

5.  Neisseria weaveri sp. nov., formerly CDC group M-5, a gram-negative bacterium associated with dog bite wounds.

Authors:  B M Andersen; A G Steigerwalt; S P O'Connor; D G Hollis; R S Weyant; R E Weaver; D J Brenner
Journal:  J Clin Microbiol       Date:  1993-09       Impact factor: 5.948

Review 6.  A case of lower respiratory tract infection caused by Neisseria weaveri and review of the literature.

Authors:  S Panagea; R Bijoux; J E Corkill; F Al Rashidi; C A Hart
Journal:  J Infect       Date:  2002-02       Impact factor: 6.072

7.  Neisseria weaveri sp. nov. (formerly CDC group M-5), from dog bite wounds of humans.

Authors:  B Holmes; M Costas; S L On; P Vandamme; E Falsen; K Kersters
Journal:  Int J Syst Bacteriol       Date:  1993-10
  7 in total

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