| Literature DB >> 27558383 |
Peter F Dutey-Magni1,2, Graham Moon3.
Abstract
BACKGROUND: Disease prevalence models have been widely used to estimate health, lifestyle and disability characteristics for small geographical units when other data are not available. Yet, knowledge is often lacking about how to make informed decisions around the specification of such models, especially regarding spatial assumptions placed on their covariance structure. This paper is concerned with understanding processes of spatial dependency in unexplained variation in chronic morbidity.Entities:
Keywords: Chronic morbidity; Disease mapping; Limiting longstanding illness; Neighbourhood matrices; Spatial autocorrelation; Spatial dependency; Spatial interaction; Spatial weights
Mesh:
Year: 2016 PMID: 27558383 PMCID: PMC4997767 DOI: 10.1186/s12942-016-0057-5
Source DB: PubMed Journal: Int J Health Geogr ISSN: 1476-072X Impact factor: 3.918
Standardised proximity matrices tested in this paper for between-LADs and between-MSOAs autocorrelation
| Matrix identifiers | Method of construction | |
|---|---|---|
| LADs | MSOAs | |
|
|
| Contiguity matrix (with isles attached to the mainland) [spdep + manual adjustments] |
|
|
|
|
|
| – | Up to |
|
| – | Up to |
Between-area variance in odds of LLTI by demographic group for LADs and MSOAs
Source: Authors’ calculations, 2011 census table DC3201EW [39]
Cells are shaded according to the decile corresponding to their value
Between-area coefficients of variation for odds of LLTI by demographic group for LADs and MSOAs
Source: Authors’ calculations, 2011 census table DC3201EW, [39, 60]
Cells are shaded according to the decile corresponding to their value
Moran’s I statistics of spatial autocorrelation in odds of LLTI by adjacency matrix and demographic group
Source: Authors’ calculations, 2011 census table DC3201EW [39], Office for National Statistics migration and digital boundary data [60, 62]
Cells are shaded according to the decile corresponding to their value
Regression coefficients: baseline models
| M0 | White | Black | Asian | Mixed | Other | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| SE |
|
| SE |
|
| SE |
|
| SE |
|
| SE |
| |
| (Intercept) |
| 0.025 | <.001 |
| 0.034 | <.001 |
| 0.059 | <.001 |
| 0.054 | <.001 |
| 0.049 | <.001 |
| Male |
| 0.001 | <.001 |
| 0.007 | <.001 |
| 0.005 | <.001 | 0.138 | 0.009 | <.001 |
| 0.012 | <.001 |
| Aged 16–49 | 0.914 | 0.003 | <.001 | 0.816 | 0.012 | <.001 | 0.658 | 0.009 | <.001 | 0.980 | 0.012 | <.001 | 0.924 | 0.023 | <.001 |
| Aged 50–64 | 2.036 | 0.003 | <.001 | 1.975 | 0.013 | <.001 | 2.466 | 0.009 | <.001 | 2.342 | 0.015 | <.001 | 2.417 | 0.024 | <.001 |
| Aged 65+ | 3.179 | 0.003 | <.001 | 3.232 | 0.013 | <.001 | 3.623 | 0.009 | <.001 | 3.201 | 0.016 | <.001 | 3.353 | 0.025 | <.001 |
| Wales | 0.274 | 0.047 | <.001 | 0.191 | 0.080 | 0.017 |
| 0.079 | 0.727 | 0.269 | 0.056 | <.001 | 0.181 | 0.080 | 0.024 |
| Lond. centre |
| 0.076 | 0.001 | 0.491 | 0.097 | <.001 |
| 0.115 | 0.872 | 0.069 | 0.085 | 0.416 | 0.165 | 0.103 | 0.108 |
| Prospering |
| 0.029 | <.001 |
| 0.040 | <.001 |
| 0.056 | <.001 |
| 0.041 | <.001 |
| 0.047 | <.001 |
| Coastal |
| 0.040 | <.001 | 0.147 | 0.069 | 0.033 |
| 0.079 | <.001 |
| 0.059 | 0.206 |
| 0.077 | 0.208 |
| Mining | 0.163 | 0.037 | <.001 | 0.008 | 0.054 | 0.876 | 0.034 | 0.069 | 0.620 | 0.088 | 0.053 | 0.093 | 0.024 | 0.061 | 0.698 |
| % same ethnicity | 1.887 | 0.297 | <.001 |
| 1.329 | <.001 | 6.477 | 1.634 | <.001 | ||||||
|
| 0.041 | 0.202 | 0.062 | 0.248 | 0.092 | 0.303 | 0.042 | 0.205 | 0.051 | 0.227 | |||||
| Shapiro–Wilks | 0.996 | 0.519 | 0.994 | 0.148 | 0.995 | 0.362 | 0.997 | 0.724 | 0.989 | 0.009 | |||||
| Moran’s | 0.511 | <.001 | 0.431 | <.001 | 0.550 | <.001 | 0.503 | <.001 | 0.394 | <.001 | |||||
| AIC | 97,530 | 15,517 | 21,760 | 16,112 | 12,298 | ||||||||||
Regression coefficients: testing models with LAD-level mortality SMRs as predictors of LAD-level prevalence of LLTI
| M1 | White | Black | Asian | Mixed | Other | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| SE |
|
| SE |
|
| SE |
|
| SE |
|
| SE |
| |
| (Intercept) |
| 0.024 | <.001 |
| 0.035 | <.001 |
| 0.037 | <.001 |
| 0.024 | <.001 |
| 0.039 | <.001 |
| Male |
| 0.001 | <.001 |
| 0.007 | <.001 |
| 0.005 | <.001 | 0.137 | 0.009 | <.001 |
| 0.012 | <.001 |
| Aged 16–49 | 0.914 | 0.003 | <.001 | 0.814 | 0.012 | <.001 | 0.658 | 0.009 | <.001 | 0.979 | 0.012 | <.001 | 0.934 | 0.023 | <.001 |
| Aged 50–64 | 2.036 | 0.003 | <.001 | 1.974 | 0.013 | <.001 | 2.466 | 0.009 | <.001 | 2.344 | 0.015 | <.001 | 2.431 | 0.024 | <.001 |
| Aged 65+ | 3.179 | 0.003 | <.001 | 3.231 | 0.013 | <.001 | 3.624 | 0.009 | <.001 | 3.204 | 0.016 | <.001 | 3.362 | 0.025 | <.001 |
| Wales | 0.270 | 0.046 | <.001 | 0.184 | 0.080 | 0.022 |
| 0.075 | 0.243 | 0.248 | 0.046 | <.001 | 0.132 | 0.082 | 0.106 |
| Lond. centre |
| 0.074 | 0.001 | 0.500 | 0.097 | <.001 | 0.090 | 0.109 | 0.412 | 0.063 | 0.064 | 0.325 | 0.392 | 0.094 | <.001 |
| Prospering |
| 0.028 | <.001 |
| 0.045 | <.001 |
| 0.048 | <.001 |
| 0.029 | 0.071 |
| 0.046 | <.001 |
| Coastal |
| 0.039 | <.001 | 0.153 | 0.069 | 0.026 |
| 0.066 | <.001 | 0.169 | 0.040 | <.001 |
| 0.073 | 0.021 |
| Mining | 0.162 | 0.036 | <.001 |
| 0.055 | 0.822 |
| 0.056 | <.001 | 0.137 | 0.034 | <.001 |
| 0.058 | 0.032 |
| SMR | 0.028 | 0.021 | 0.180 | 0.191 | 0.021 | <.001 | 0.180 | 0.013 | <.001 | 0.091 | 0.022 | <.001 | |||
| Male SMR | 0.033 | 0.002 | <.001 | ||||||||||||
| Female SMR |
| 0.002 | <.001 | ||||||||||||
|
| 0.039 | 0.198 | 0.061 | 0.247 | 0.081 | 0.285 | 0.024 | 0.155 | 0.056 | 0.237 | |||||
| Moran’s | 0.512 | <.001 | 0.419 | <.001 | 0.456 | <.001 | 0.439 | <.001 | 0.354 | <.001 | |||||
| AIC | 95,594 | 15,517 | 21,726 | 15,981 | 12,225 | ||||||||||
| Reduction in AIC (M0) | 1936 | 0 | 34 | 131 | 73 | ||||||||||
SMR directly standardised mortality rate
Variable Z-standardised
Regression coefficients: final models predicting LAD-level prevalence of LLTI
| M2 | White | Black | Asian | Mixed | Other | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| SE |
|
| SE |
|
| SE |
|
| SE |
|
| SE |
| |
| Intercept |
| 0.019 | <.001 |
| 0.035 | <.001 |
| 0.053 | <.001 |
| 0.045 | <.001 |
| 0.050 | <.001 |
| Male |
| 0.001 | <.001 |
| 0.007 | <.001 |
| 0.006 | <.001 | 0.137 | 0.009 | <.001 |
| 0.012 | <.001 |
| Aged 16–49 | 0.888 | 0.003 | <.001 | 0.814 | 0.012 | <.001 | 0.589 | 0.011 | <.001 | 0.981 | 0.012 | <.001 | 0.954 | 0.023 | <.001 |
| Aged 50–64 | 1.968 | 0.003 | <.001 | 1.947 | 0.014 | <.001 | 2.353 | 0.011 | <.001 | 2.304 | 0.016 | <.001 | 2.466 | 0.025 | <.001 |
| Aged 65+ | 3.150 | 0.003 | <.001 | 3.181 | 0.014 | <.001 | 3.554 | 0.010 | <.001 | 3.183 | 0.016 | <.001 | 3.381 | 0.025 | <.001 |
| Wales | 0.344 | 0.034 | <.001 | 0.222 | 0.081 | 0.007 |
| 0.072 | 0.491 | 0.275 | 0.047 | <.001 | 0.178 | 0.079 | 0.024 |
| Lond. Centre |
| 0.056 | 0.062 | 0.526 | 0.096 | <.001 | 0.100 | 0.101 | 0.321 | 0.140 | 0.063 | 0.028 | 0.180 | 0.096 | 0.060 |
| Prospering |
| 0.024 | <.001 |
| 0.046 | <.001 |
| 0.054 | 0.034 |
| 0.036 | 0.003 |
| 0.052 | 0.078 |
| Coastal |
| 0.030 | 0.549 | 0.184 | 0.070 | 0.008 |
| 0.072 | 0.005 | 0.103 | 0.049 | 0.035 |
| 0.075 | 0.977 |
| Mining | 0.092 | 0.027 | <.001 |
| 0.054 | 0.819 |
| 0.061 | 0.278 | 0.043 | 0.041 | 0.292 |
| 0.058 | 0.886 |
| % same ethnicity | 1.898 | 0.260 | 0.000 |
| 1.029 | 0.001 | 8.926 | 1.598 | <.001 | ||||||
| SAR | 0.004 | 0.001 | <.001 | 0.003 | 0.002 | 0.068 | 0.002 | 0.002 | 0.302 | 0.003 | 0.001 | 0.001 | 0.005 | 0.002 | 0.005 |
| SAR | 0.001 | 0.000 | <.001 |
| 0.001 | <.001 | |||||||||
| SAR | 0.004 | 0.000 | <.001 | 0.003 | 0.001 | <.001 | |||||||||
| SAR | 0.010 | 0.000 | <.001 | 0.002 | 0.001 | 0.015 |
| 0.001 | <.001 | ||||||
| SAR | 0.004 | 0.000 | <.001 | 0.002 | 0.001 | 0.040 | |||||||||
| SMR |
| 0.029 | 0.030 | 0.061 | 0.028 | 0.032 | 0.098 | 0.018 | <.001 | 0.147 | 0.030 | <.001 | |||
| SMR | 0.037 | 0.008 | <.001 | ||||||||||||
| SMR | 0.028 | 0.012 | 0.020 | 0.119 | 0.011 | <.001 |
| 0.012 | <.001 | ||||||
| SMR | 0.092 | 0.010 | <.001 | 0.178 | 0.012 | <.001 | 0.086 | 0.013 | <.001 | ||||||
| SMR | 0.121 | 0.013 | <.001 | 0.101 | 0.010 | <.001 | |||||||||
| Male SMR | 0.027 | 0.002 | <.001 | ||||||||||||
| Female SMR |
| 0.002 | <.001 | ||||||||||||
|
| 0.021 | 0.146 | 0.059 | 0.243 | 0.068 | 0.260 | 0.022 | 0.147 | 0.042 | 0.205 | |||||
| Shapiro–Wilks | 0.994 | 0.192 | 0.996 | 0.423 | 0.995 | 0.314 | 0.997 | 0.863 | 0.987 | 0.003 | |||||
| Moran’s | 0.555 | <.001 | 0.412 | <.001 | 0.449 | <.001 | 0.410 | <.001 | 0.344 | <.001 | |||||
| AIC | 85,779 | 15,239 | 20,925 | 15,837 | 12,040 | ||||||||||
SAR indirectly standardised emergency admission ratio, SMR directly standardised mortality rate
Variable centred around 1.00
Variable Z-standardised
Matrix of pairwise correlation in random intercepts between models (M2)
Cells are shaded according to the decile corresponding to their value
Fig. 1Model (M2): Q—Q plots of area residuals against a normal distribution and maps of transformed residuals (odds ratio scale) for White (a), Mixed (b) and Asian (c) populations. Plots Residuals of model (M2) are compared to a theoretical normal distribution with the same mean and standard deviation to assess normality. Choropleths Model residuals are converted on the odds ratio scale using the exponential function to map heterogeneity in odds of LLTI across areas once differences in covariates are taken into account. Shades of red (blue) signal areas where the prevalence of LLTI is higher (lower) than expected given their population age, area classification and local rates of emergency hospitalisations
Fig. 2Model (M2): Q—Q plots of area residuals against a normal distribution and maps of transformed residuals (odds ratio scale) for Black (a) and Other (b) populations. Plots Residuals of model (M2) are compared to a theoretical normal distribution with the same mean and standard deviation to assess normality. Choropleths Model residuals are converted on the odds ratio scale using the exponential function to map heterogeneity in odds of LLTI across areas once differences in covariates are taken into account. Shades of red (blue) signal areas where the prevalence of LLTI is higher (lower) than expected given their population age, area classification and local rates of emergency hospitalisations
Fig. 3Model (M2): Maps of LISA with significant clusters (asterisks) and Moran scatterplots of area residuals for White (a), Mixed (b) and Asian (c) populations. Moran scatterplots Global spatial clustering of LLTI is represented graphically as the relationship between area residuals (on the logit scale) and the spatially lagged area residuals. Some neighbourhoods exhibit higher-than-average clustering and appear above the line of best fit. Significant clusters are marked with a red dot. Choropleths Shades of yellow indicate areas with a high LISA, while shades of blue indicate areas with a low LISA. Statistically significantly higher-than-average LISAs are marked with an asterisk (*) and indicate presence of a statistically significant spatial cluster at the 95 % confidence level
Fig. 4Model (M2): Maps of LISA with significant clusters (asterisks) and Moran scatterplots of area residuals for Black (a) and Other (b) populations. Moran scatterplots Global spatial clustering of LLTI is represented graphically as the relationship between area residuals (on the logit scale) and the spatially lagged area residuals. Some neighbourhoods exhibit higher-than-average clustering and appear above the line of best fit. Significant clusters are marked with a red dot. Choropleths Shades of yellow indicate areas with a high LISA, while shades of blue indicate areas with a low LISA. Statistically significantly higher-than-average LISAs are marked with an asterisk (*) and indicate presence of a statistically significant spatial cluster at the 95 % confidence level