Literature DB >> 27557447

Hybrid Dendrimers of PPI(core)-PAMAM(shell): A Molecular Dynamics Simulation Study.

Sajjad Kavyani1, Sepideh Amjad-Iranagh1, Mitra Dadvar1, Hamid Modarress1.   

Abstract

The structural properties of hybrid dendrimers PPI(core)-PAMAM(shell) for application in drug delivery are studied by coarse-grained molecular dynamics simulation, and their capacity to encapsulate drug guest molecules such as pyrene is investigated by changing the core (PPI) in the PPI-PAMAM hybrids. For this purpose, a coarse-grained model for PPI dendrimer is developed and is used to predict the structural properties as a function of PPI core size, such as the size of hybrid dendrimers, the depth of water penetration, the extent of back-folding of their chain terminals, the size and distribution of created cavities, and asphericity. The results show that the location of pyrene in the interior structure of the hybrids is independent of PPI core size and the branching chains create a barrier against the penetrating molecules in the shell of PPI. Then, by adding the PAMAM to the surface of PPI, this barrier is removed, and this will enhance the encapsulation capacity of the hybrid.

Entities:  

Year:  2016        PMID: 27557447     DOI: 10.1021/acs.jpcb.6b05142

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  5 in total

1.  Interaction of drugs amlodipine and paroxetine with the metabolizing enzyme CYP2B4: a molecular dynamics simulation study.

Authors:  Abbas Yousefpour; Hamid Modarress; Fatemeh Goharpey; Sepideh Amjad-Iranagh
Journal:  J Mol Model       Date:  2018-02-23       Impact factor: 1.810

Review 2.  Dendrimers: Amazing Platforms for Bioactive Molecule Delivery Systems.

Authors:  Claudia Sandoval-Yañez; Cristian Castro Rodriguez
Journal:  Materials (Basel)       Date:  2020-01-24       Impact factor: 3.623

Review 3.  Mechanistic Understanding From Molecular Dynamics Simulation in Pharmaceutical Research 1: Drug Delivery.

Authors:  Alex Bunker; Tomasz Róg
Journal:  Front Mol Biosci       Date:  2020-11-25

4.  Molecular dynamics simulation study of doxorubicin adsorption on functionalized carbon nanotubes with folic acid and tryptophan.

Authors:  Tahereh Arabian; Sepideh Amjad-Iranagh; Rouein Halladj
Journal:  Sci Rep       Date:  2021-12-20       Impact factor: 4.379

5.  Noncovalent Interactions with PAMAM and PPI Dendrimers Promote the Cellular Uptake and Photodynamic Activity of Rose Bengal: The Role of the Dendrimer Structure.

Authors:  Krzysztof Sztandera; Michał Gorzkiewicz; Ana Sofia Dias Martins; Lorenzo Pallante; Eric Adriano Zizzi; Marcello Miceli; Mateusz Ba Tal; Catarina Pinto Reis; Marco A Deriu; Barbara Klajnert-Maculewicz
Journal:  J Med Chem       Date:  2021-09-21       Impact factor: 7.446

  5 in total

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