Literature DB >> 27556338

Following Metabolism in Living Microorganisms by Hyperpolarized (1)H NMR.

Piotr Dzien1,2, Anne Fages, Ghil Jona, Kevin M Brindle2, Markus Schwaiger1, Lucio Frydman.   

Abstract

Dissolution dynamic nuclear polarization (dDNP) is used to enhance the sensitivity of nuclear magnetic resonance (NMR), enabling monitoring of metabolism and specific enzymatic reactions in vivo. dDNP involves rapid sample dissolution and transfer to a spectrometer/scanner for subsequent signal detection. So far, most biologically oriented dDNP studies have relied on hyperpolarizing long-lived nuclear spin species such as (13)C in small molecules. While advantages could also arise from observing hyperpolarized (1)H, short relaxation times limit the utility of prepolarizing this sensitive but fast relaxing nucleus. Recently, it has been reported that (1)H NMR peaks in solution-phase experiments could be hyperpolarized by spontaneous magnetization transfers from bound (13)C nuclei following dDNP. This work demonstrates the potential of this sensitivity-enhancing approach to probe the enzymatic process that could not be suitably resolved by (13)C dDNP MR. Here we measured, in microorganisms, the action of pyruvate decarboxylase (PDC) and pyruvate formate lyase (PFL)-enzymes that catalyze the decarboxylation of pyruvate to form acetaldehyde and formate, respectively. While (13)C NMR did not possess the resolution to distinguish the starting pyruvate precursor from the carbonyl resonances in the resulting products, these processes could be monitored by (1)H NMR at 500 MHz. These observations were possible in both yeast and bacteria in minute-long kinetic measurements where the hyperpolarized (13)C enhanced, via (13)C → (1)H cross-relaxation, the signals of protons binding to the (13)C over the course of enzymatic reactions. In addition to these spontaneous heteronuclear enhancement experiments, single-shot acquisitions based on J-driven (13)C → (1)H polarization transfers were also carried out. These resulted in higher signal enhancements of the (1)H resonances but were not suitable for multishot kinetic studies. The potential of these (1)H-based approaches for measurements in vivo is briefly discussed.

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Year:  2016        PMID: 27556338     DOI: 10.1021/jacs.6b07483

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  9 in total

1.  Metabolic Measurements of Nonpermeating Compounds in Live Cells Using Hyperpolarized NMR.

Authors:  Mengxiao Liu; Christian Hilty
Journal:  Anal Chem       Date:  2017-12-27       Impact factor: 6.986

2.  In vivo hyperpolarization transfer in a clinical MRI scanner.

Authors:  Cornelius von Morze; Galen D Reed; Peder E Larson; Daniele Mammoli; Albert P Chen; James Tropp; Mark Van Criekinge; Michael A Ohliger; John Kurhanewicz; Daniel B Vigneron; Matthew E Merritt
Journal:  Magn Reson Med       Date:  2018-02-27       Impact factor: 4.668

3.  Dynamic 1 H imaging of hyperpolarized [1-13 C]lactate in vivo using a reverse INEPT experiment.

Authors:  Jiazheng Wang; Felix Kreis; Alan J Wright; Richard L Hesketh; Malcolm H Levitt; Kevin M Brindle
Journal:  Magn Reson Med       Date:  2017-05-05       Impact factor: 4.668

4.  Hyperpolarized long-lived nuclear spin states in monodeuterated methyl groups.

Authors:  Stuart J Elliott; Benno Meier; Basile Vuichoud; Gabriele Stevanato; Lynda J Brown; Javier Alonso-Valdesueiro; Lyndon Emsley; Sami Jannin; Malcolm H Levitt
Journal:  Phys Chem Chem Phys       Date:  2018-04-18       Impact factor: 3.676

Review 5.  In-Cell NMR: Analysis of Protein-Small Molecule Interactions, Metabolic Processes, and Protein Phosphorylation.

Authors:  Amit Kumar; Lars T Kuhn; Jochen Balbach
Journal:  Int J Mol Sci       Date:  2019-01-17       Impact factor: 5.923

Review 6.  Acquisition strategies for spatially resolved magnetic resonance detection of hyperpolarized nuclei.

Authors:  Geoffrey J Topping; Christian Hundshammer; Luca Nagel; Martin Grashei; Maximilian Aigner; Jason G Skinner; Rolf F Schulte; Franz Schilling
Journal:  MAGMA       Date:  2019-12-06       Impact factor: 2.310

7.  Room-temperature dynamic nuclear polarization enhanced NMR spectroscopy of small biological molecules in water.

Authors:  Danhua Dai; Xianwei Wang; Yiwei Liu; Xiao-Liang Yang; Clemens Glaubitz; Vasyl Denysenkov; Xiao He; Thomas Prisner; Jiafei Mao
Journal:  Nat Commun       Date:  2021-11-25       Impact factor: 14.919

8.  1H Hyperpolarization of Solutions by Overhauser Dynamic Nuclear Polarization with 13C-1H Polarization Transfer.

Authors:  Yu Rao; Amrit Venkatesh; Pinelopi Moutzouri; Lyndon Emsley
Journal:  J Phys Chem Lett       Date:  2022-08-15       Impact factor: 6.888

9.  Fast 2D NMR Spectroscopy for In vivo Monitoring of Bacterial Metabolism in Complex Mixtures.

Authors:  Rupashree Dass; Katarzyna Grudzia Ż; Takao Ishikawa; Michał Nowakowski; Renata Dȩbowska; Krzysztof Kazimierczuk
Journal:  Front Microbiol       Date:  2017-07-14       Impact factor: 5.640

  9 in total

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