Literature DB >> 27551997

2-Aminopurine-modified DNA homopolymers for robust and sensitive detection of mercury and silver.

Wenhu Zhou1, Jinsong Ding2, Juewen Liu3.   

Abstract

Heavy metal detection is a key topic in analytical chemistry. DNA-based metal recognition has advanced significantly producing many specific metal ligands, such as thymine for Hg2+ and cytosine for Ag+. For practical applications, however, robust sensors that can work in a diverse range of salt concentrations need to be developed, while most current sensing strategies cannot meet this requirement. In this work, 2-aminopurine (2AP) is used as a fluorescence label embedded in the middle of four 10-mer DNA homopolymers. 2AP can be quenched up to 98% in these DNA without an external quencher. The interaction between 2AP and all common metal ions is studied systematically for both free 2AP base and 2AP embedded DNA homopolymers. With such low background, Hg2+ induces up to 14-fold signal enhancement for the poly-T DNA, and Ag+ enhances up to 10-fold for the poly-C DNA. A detection limit of 3nM is achieved for both metals. With these four probes, silver and mercury can be readily discriminated from the rest. A comparison with other signaling methods was made using fluorescence resonance energy transfer, graphene oxide, and SYBR Green I staining, respectively, confirming the robustness of the 2AP label. Detection of Hg2+ in Lake Huron water was also achieved with a similar sensitivity. This work has provided a comprehensive fundamental understanding of using 2AP as a label for metal detection, and has achieved the highest fluorescence enhancement for non-protein targets. Copyright Â
© 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Aptamers; Biosensors; DNA; Fluorescence; Metal ions

Mesh:

Substances:

Year:  2016        PMID: 27551997     DOI: 10.1016/j.bios.2016.08.033

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  10 in total

1.  Forced Intercalation (FIT)-Aptamers.

Authors:  Sasha B Ebrahimi; Devleena Samanta; Ho Fung Cheng; Levy I Nathan; Chad A Mirkin
Journal:  J Am Chem Soc       Date:  2019-08-23       Impact factor: 15.419

2.  A highly specific sodium aptamer probed by 2-aminopurine for robust Na+ sensing.

Authors:  Wenhu Zhou; Jinsong Ding; Juewen Liu
Journal:  Nucleic Acids Res       Date:  2016-09-20       Impact factor: 16.971

3.  A Facile Aptasensor for Instantaneous Determination of Cadmium Ions Based on Fluorescence Amplification Effect of MOPS on FAM-Labeled Aptamer.

Authors:  Yang Liu; Dongwei Zhang; Jina Ding; Kashif Hayat; Xijia Yang; Xuejia Zhan; Dan Zhang; Yitong Lu; Pei Zhou
Journal:  Biosensors (Basel)       Date:  2021-04-23

4.  A sensitive fluorometric sensor for Ag+ based on the hybridization chain reaction coupled with a glucose oxidase dual-signal amplification strategy.

Authors:  Yubin Li; Ling Xie; Jiaming Yuan; Huazhong Liu
Journal:  RSC Adv       Date:  2020-07-13       Impact factor: 4.036

5.  Single-stranded DNA probe paired aptasensor with extra dye binding sites to enhance its fluorescence response in the presence of a target compound.

Authors:  Seo Won Cho; Hyun Jeong Lim; Beelee Chua; Ahjeong Son
Journal:  RSC Adv       Date:  2021-06-21       Impact factor: 3.361

6.  Label-Free and Sensitive Determination of Cadmium Ions Using a Ti-Modified Co3O4-Based Electrochemical Aptasensor.

Authors:  Yang Liu; Dongwei Zhang; Jina Ding; Kashif Hayat; Xijia Yang; Xuejia Zhan; Dan Zhang; Yitong Lu; Pei Zhou
Journal:  Biosensors (Basel)       Date:  2020-11-30

Review 7.  Growing prospects of DNA nanomaterials in novel biomedical applications.

Authors:  Zhiguang Suo; Jingqi Chen; Xialing Hou; Ziheng Hu; Feifei Xing; Lingyan Feng
Journal:  RSC Adv       Date:  2019-05-28       Impact factor: 4.036

8.  Universally applicable, quantitative PCR method utilizing fluorescent nucleobase analogs.

Authors:  Hyo Yong Kim; Taihua Li; Cheulhee Jung; Rongzhan Fu; Dae-Yeon Cho; Ki Soo Park; Hyun Gyu Park
Journal:  RSC Adv       Date:  2018-11-07       Impact factor: 4.036

9.  Label-free fluorescent aptasensor for chloramphenicol based on hybridization chain reaction amplification and G-quadruplex/N-methyl mesoporphyrin IX complexation.

Authors:  Wentao Zheng; Yubin Li; Liting Zhao; Ciling Li; Lei Wang
Journal:  RSC Adv       Date:  2022-06-22       Impact factor: 4.036

10.  Short DNA Oligonucleotide as a Ag+ Binding Detector.

Authors:  Fusheng Shen; Song Mao; Johnsi Mathivanan; Ying Wu; Arun Richard Chandrasekaran; Hehua Liu; Jianhua Gan; Jia Sheng
Journal:  ACS Omega       Date:  2020-10-28
  10 in total

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