Literature DB >> 27547819

Structure of the Essential Mtb FadD32 Enzyme: A Promising Drug Target for Treating Tuberculosis.

Misty L Kuhn1, Evan Alexander2, George Minasov3, Holland J Page4, Zdzislaw Warwrzak5, Ludmilla Shuvalova3, Kristin J Flores3, Daniel J Wilson5, Ce Shi2, Courtney C Aldrich6, Wayne F Anderson3.   

Abstract

Mycolic acids are indispensible lipids of Mycobacterium tuberculosis (Mtb), the causative agent of tuberculosis (TB), and contribute to the distinctive architecture and impermeability of the mycobacterial cell envelope. FadD32 plays a pivotal role in mycolic acid biosynthesis by functionally linking fatty acid synthase (FAS) and polyketide synthase (PKS) biosynthetic pathways. FadD32, a fatty acyl-AMP ligase (FAAL), represents one of the best genetically and chemically validated new TB drug targets. We have determined the three-dimensional crystal structure of Mtb FadD32 in complex with a ligand specifically designed to stabilize the catalytically active adenylate-conformation, which provides a foundation for structure-based drug design efforts against this essential protein. The structure also captures the unique interactions of a FAAL-specific insertion sequence and provides insight into the specificity and mechanism of fatty acid transfer.

Entities:  

Keywords:  FadD32; Mycobacterium tuberculosis; fatty acyl-AMP ligase; mycolic acid biosynthesis

Year:  2016        PMID: 27547819      PMCID: PMC4989915          DOI: 10.1021/acsinfecdis.6b00082

Source DB:  PubMed          Journal:  ACS Infect Dis        ISSN: 2373-8227            Impact factor:   5.084


  44 in total

1.  SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model.

Authors:  A A Vaguine; J Richelle; S J Wodak
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-01-01

Review 2.  Fatty acyl-AMP ligases and polyketide synthases are unique enzymes of lipid biosynthetic machinery in Mycobacterium tuberculosis.

Authors:  Debasisa Mohanty; Rajan Sankaranarayanan; Rajesh S Gokhale
Journal:  Tuberculosis (Edinb)       Date:  2011-05-20       Impact factor: 3.131

3.  Structures of Mycobacterium tuberculosis FadD10 protein reveal a new type of adenylate-forming enzyme.

Authors:  Zhen Liu; Thomas R Ioerger; Feng Wang; James C Sacchettini
Journal:  J Biol Chem       Date:  2013-04-26       Impact factor: 5.157

4.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

5.  Structural characterization of a 140 degrees domain movement in the two-step reaction catalyzed by 4-chlorobenzoate:CoA ligase.

Authors:  Albert S Reger; Rui Wu; Debra Dunaway-Mariano; Andrew M Gulick
Journal:  Biochemistry       Date:  2008-07-12       Impact factor: 3.162

6.  Rational redesign of the 4-chlorobenzoate binding site of 4-chlorobenzoate: coenzyme a ligase for expanded substrate range.

Authors:  Rui Wu; Albert S Reger; Jian Cao; Andrew M Gulick; Debra Dunaway-Mariano
Journal:  Biochemistry       Date:  2007-11-21       Impact factor: 3.162

7.  Synthesis and structure-activity relationships of phenyl-substituted coumarins with anti-tubercular activity that target FadD32.

Authors:  Tomohiko Kawate; Noriaki Iwase; Motohisa Shimizu; Sarah A Stanley; Samantha Wellington; Edward Kazyanskaya; Deborah T Hung
Journal:  Bioorg Med Chem Lett       Date:  2013-09-19       Impact factor: 2.823

8.  A polyketide synthase catalyzes the last condensation step of mycolic acid biosynthesis in mycobacteria and related organisms.

Authors:  Damien Portevin; Célia De Sousa-D'Auria; Christine Houssin; Christine Grimaldi; Mohamed Chami; Mamadou Daffé; Christophe Guilhot
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-26       Impact factor: 11.205

9.  Enzymic activation and transfer of fatty acids as acyl-adenylates in mycobacteria.

Authors:  Omita A Trivedi; Pooja Arora; Vijayalakshmi Sridharan; Rashmi Tickoo; Debasisa Mohanty; Rajesh S Gokhale
Journal:  Nature       Date:  2004-03-25       Impact factor: 49.962

10.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21
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  13 in total

1.  Discovery of heterocyclic replacements for the coumarin core of anti-tubercular FadD32 inhibitors.

Authors:  Chao Fang; Katie K Lee; Raymond Nietupski; Robert H Bates; Raquel Fernandez-Menendez; Eva Maria Lopez-Roman; Laura Guijarro-Lopez; Yunxing Yin; Zuozhong Peng; James E Gomez; Stewart Fisher; David Barros-Aguirre; Brian K Hubbard; Michael H Serrano-Wu; Deborah T Hung
Journal:  Bioorg Med Chem Lett       Date:  2018-09-29       Impact factor: 2.823

2.  Development of small-molecule inhibitors of fatty acyl-AMP and fatty acyl-CoA ligases in Mycobacterium tuberculosis.

Authors:  Marzena Baran; Kimberly D Grimes; Paul A Sibbald; Peng Fu; Helena I M Boshoff; Daniel J Wilson; Courtney C Aldrich
Journal:  Eur J Med Chem       Date:  2020-06-13       Impact factor: 6.514

3.  Ser/Thr Phosphorylation Regulates the Fatty Acyl-AMP Ligase Activity of FadD32, an Essential Enzyme in Mycolic Acid Biosynthesis.

Authors:  Nguyen-Hung Le; Virginie Molle; Nathalie Eynard; Mathieu Miras; Alexandre Stella; Fabienne Bardou; Ségolène Galandrin; Valérie Guillet; Gwenaëlle André-Leroux; Marco Bellinzoni; Pedro Alzari; Lionel Mourey; Odile Burlet-Schiltz; Mamadou Daffé; Hedia Marrakchi
Journal:  J Biol Chem       Date:  2016-09-02       Impact factor: 5.157

4.  Rv0646c, an esterase from M. tuberculosis, up-regulates the host immune response in THP-1 macrophages cells.

Authors:  Ruchi Rastogi; Arbind Kumar; Jagdeep Kaur; Varinder Saini; Jasbinder Kaur; Archana Bhatnagar
Journal:  Mol Cell Biochem       Date:  2018-01-31       Impact factor: 3.396

5.  Biosynthesis, Mechanism of Action, and Inhibition of the Enterotoxin Tilimycin Produced by the Opportunistic Pathogen Klebsiella oxytoca.

Authors:  Evan M Alexander; Dale F Kreitler; Valeria Guidolin; Alexander K Hurben; Eric Drake; Peter W Villalta; Silvia Balbo; Andrew M Gulick; Courtney C Aldrich
Journal:  ACS Infect Dis       Date:  2020-06-24       Impact factor: 5.084

6.  The carbon chain-selective adenylation enzyme TamA: the missing link between fatty acid and pyrrole natural product biosynthesis.

Authors:  Piera M Marchetti; Van Kelly; Joanna P Simpson; Mairi Ward; Dominic J Campopiano
Journal:  Org Biomol Chem       Date:  2018-04-18       Impact factor: 3.876

Review 7.  Targeting adenylate-forming enzymes with designed sulfonyladenosine inhibitors.

Authors:  Michaelyn C Lux; Lisa C Standke; Derek S Tan
Journal:  J Antibiot (Tokyo)       Date:  2019-04-15       Impact factor: 2.649

Review 8.  The quest for the holy grail: new antitubercular chemical entities, targets and strategies.

Authors:  Stanislav Huszár; Kelly Chibale; Vinayak Singh
Journal:  Drug Discov Today       Date:  2020-02-13       Impact factor: 7.851

9.  Versatility of 7-Substituted Coumarin Molecules as Antimycobacterial Agents, Neuronal Enzyme Inhibitors and Neuroprotective Agents.

Authors:  Erika Kapp; Hanri Visser; Samantha L Sampson; Sarel F Malan; Elizabeth M Streicher; Germaine B Foka; Digby F Warner; Sylvester I Omoruyi; Adaze B Enogieru; Okobi E Ekpo; Frank T Zindo; Jacques Joubert
Journal:  Molecules       Date:  2017-09-30       Impact factor: 4.411

Review 10.  MmpL3 Inhibition: A New Approach to Treat Nontuberculous Mycobacterial Infections.

Authors:  Jigar P Sethiya; Melanie A Sowards; Mary Jackson; Elton Jeffrey North
Journal:  Int J Mol Sci       Date:  2020-08-27       Impact factor: 5.923

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