Literature DB >> 27543393

Genomic changes detected after serial passages in cell culture of virulent human G1P[8] rotaviruses.

Takeshi Tsugawa1, Hiroyuki Tsutsumi2.   

Abstract

Serial passages of a virulent mouse rotavirus in cell cultures caused a loss of virulence in mice. To gain insight into the genomic mutations in human rotavirus during cell culture and its attenuation in humans, we serially passaged three wild type human G1P[8] rotavirus strains (Wa, DC3695, DC5685) derived from diarrheal stool samples up to 60 times in two different cell cultures (human colon adenocarcinoma cell line: HT29, and primary African green monkey kidney cells: primary AGMK). We sequenced the whole genomes of 60 times-passaged strains and compared them with those of the original viruses. Most substitutions were detected in VP4, followed by substitutions in VP7 and NSP4 genes. Substitution at amino acid 385 in the putative VP4 fusion domain and substitution T45M in NSP4 genes were detected in all AGMK-passaged strains, respectively. These genomic changes are likely to correlate with a loss of rotavirus virulence in humans. Copyright Â
© 2016. Published by Elsevier B.V.

Entities:  

Keywords:  Cell culture; Mutation; Rotavirus; Sequence; Serial passage; Virulence

Mesh:

Year:  2016        PMID: 27543393     DOI: 10.1016/j.meegid.2016.08.015

Source DB:  PubMed          Journal:  Infect Genet Evol        ISSN: 1567-1348            Impact factor:   3.342


  4 in total

1.  Rotavirus VP4 Epitope of a Broadly Neutralizing Human Antibody Defined by Its Structure Bound with an Attenuated-Strain Virion.

Authors:  Simon Jenni; Zongli Li; Yuhuan Wang; Theresa Bessey; Eric N Salgado; Aaron G Schmidt; Harry B Greenberg; Baoming Jiang; Stephen C Harrison
Journal:  J Virol       Date:  2022-08-04       Impact factor: 6.549

2.  Reverse Genetics Approach for Developing Rotavirus Vaccine Candidates Carrying VP4 and VP7 Genes Cloned from Clinical Isolates of Human Rotavirus.

Authors:  Yuta Kanai; Misa Onishi; Takahiro Kawagishi; Pimfhun Pannacha; Jeffery A Nurdin; Ryotaro Nouda; Moeko Yamasaki; Tina Lusiany; Pattara Khamrin; Shoko Okitsu; Satoshi Hayakawa; Hirotaka Ebina; Hiroshi Ushijima; Takeshi Kobayashi
Journal:  J Virol       Date:  2020-12-22       Impact factor: 5.103

3.  Amino Acid Substitutions in Positions 385 and 393 of the Hydrophobic Region of VP4 May Be Associated with Rotavirus Attenuation and Cell Culture Adaptation.

Authors:  Yusheng Guo; David E Wentworth; Karla M Stucker; Rebecca A Halpin; Ham Ching Lam; Douglas Marthaler; Linda J Saif; Anastasia N Vlasova
Journal:  Viruses       Date:  2020-04-07       Impact factor: 5.048

4.  Development and evaluation of an inactivated coxsackievirus A16 vaccine in gerbils.

Authors:  Yi-Sheng Sun; Yong Xia; Fang Xu; Hang-Jing Lu; Zi-An Mao; Meng Gao; Tian-Yuan Pan; Ping-Ping Yao; Zhen Wang; Han-Ping Zhu
Journal:  Emerg Microbes Infect       Date:  2022-12       Impact factor: 19.568

  4 in total

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