Literature DB >> 27540890

Tests of species-specific models reveal the importance of drought in postglacial range shifts of a Mediterranean-climate tree: insights from integrative distributional, demographic and coalescent modelling and ABC model selection.

Jordan B Bemmels1, Pascal O Title2, Joaquín Ortego3, L Lacey Knowles2.   

Abstract

Past climate change has caused shifts in species distributions and undoubtedly impacted patterns of genetic variation, but the biological processes mediating responses to climate change, and their genetic signatures, are often poorly understood. We test six species-specific biologically informed hypotheses about such processes in canyon live oak (Quercus chrysolepis) from the California Floristic Province. These hypotheses encompass the potential roles of climatic niche, niche multidimensionality, physiological trade-offs in functional traits, and local-scale factors (microsites and local adaptation within ecoregions) in structuring genetic variation. Specifically, we use ecological niche models (ENMs) to construct temporally dynamic landscapes where the processes invoked by each hypothesis are reflected by differences in local habitat suitabilities. These landscapes are used to simulate expected patterns of genetic variation under each model and evaluate the fit of empirical data from 13 microsatellite loci genotyped in 226 individuals from across the species range. Using approximate Bayesian computation (ABC), we obtain very strong support for two statistically indistinguishable models: a trade-off model in which growth rate and drought tolerance drive habitat suitability and genetic structure, and a model based on the climatic niche estimated from a generic ENM, in which the variables found to make the most important contribution to the ENM have strong conceptual links to drought stress. The two most probable models for explaining the patterns of genetic variation thus share a common component, highlighting the potential importance of seasonal drought in driving historical range shifts in a temperate tree from a Mediterranean climate where summer drought is common.
© 2016 John Wiley & Sons Ltd.

Entities:  

Keywords:  Approximate Bayesian computation; California Floristic Province; climate change; drought; genetic structure; integrative distributional demographic and coalescent modelling

Mesh:

Year:  2016        PMID: 27540890     DOI: 10.1111/mec.13804

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  10 in total

1.  Genomic evidence of survival near ice sheet margins for some, but not all, North American trees.

Authors:  Jordan B Bemmels; L Lacey Knowles; Christopher W Dick
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-08       Impact factor: 11.205

Review 2.  Marginal Likelihoods in Phylogenetics: A Review of Methods and Applications.

Authors:  Jamie R Oaks; Kerry A Cobb; Vladimir N Minin; Adam D Leaché
Journal:  Syst Biol       Date:  2019-09-01       Impact factor: 15.683

3.  Modeling potential distribution of newly recorded ant, Brachyponera nigrita using Maxent under climate change in Pothwar region, Pakistan.

Authors:  Ammara Gull E Fareen; Tariq Mahmood; Imran Bodlah; Audil Rashid; Azeem Khalid; Shahid Mahmood
Journal:  PLoS One       Date:  2022-01-19       Impact factor: 3.240

4.  Genetic diversity and population structure of Prunus mira (Koehne) from the Tibet plateau in China and recommended conservation strategies.

Authors:  Wenquan Bao; Tana Wuyun; Tiezhu Li; Huimin Liu; Zhongmao Jiang; Xuchun Zhu; Hongyan Du; Yu-E Bai
Journal:  PLoS One       Date:  2017-11-29       Impact factor: 3.240

5.  Climatic and Soil Factors Shape the Demographical History and Genetic Diversity of a Deciduous Oak (Quercus liaotungensis) in Northern China.

Authors:  Jia Yang; Lucía Vázquez; Li Feng; Zhanlin Liu; Guifang Zhao
Journal:  Front Plant Sci       Date:  2018-10-25       Impact factor: 5.753

6.  An explicit test of Pleistocene survival in peripheral versus nunatak refugia in two high mountain plant species.

Authors:  Da Pan; Karl Hülber; Wolfgang Willner; Gerald M Schneeweiss
Journal:  Mol Ecol       Date:  2019-12-12       Impact factor: 6.185

Review 7.  Addressing alpine plant phylogeography using integrative distributional, demographic and coalescent modeling.

Authors:  Dennis J Larsson; Da Pan; Gerald M Schneeweiss
Journal:  Alp Bot       Date:  2021-07-29

8.  Aggregate population-level models informed by genetics predict more suitable habitat than traditional species-level model across the range of a widespread riparian tree.

Authors:  Shannon L J Bayliss; Monica Papeş; Jennifer A Schweitzer; Joseph K Bailey
Journal:  PLoS One       Date:  2022-09-19       Impact factor: 3.752

9.  Impacts of climate change on Capparis spinosa L. based on ecological niche modeling.

Authors:  Uzma Ashraf; Muhammad N Chaudhry; Sajid R Ahmad; Irfan Ashraf; Muhammad Arslan; Hassaan Noor; Mobeen Jabbar
Journal:  PeerJ       Date:  2018-10-16       Impact factor: 2.984

Review 10.  Small spaces, big impacts: contributions of micro-environmental variation to population persistence under climate change.

Authors:  Derek A Denney; M Inam Jameel; Jordan B Bemmels; Mia E Rochford; Jill T Anderson
Journal:  AoB Plants       Date:  2020-02-18       Impact factor: 3.276

  10 in total

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