Literature DB >> 27539716

Genome-Wide Association Analysis Identifies Dcc as an Essential Factor in the Innervation of the Peripheral Vestibular System in Inbred Mice.

Pezhman Salehi1, Anthony Myint1, Young J Kim2, Marshall X Ge1, Joel Lavinsky1,3, Maria K Ho1,4, Amanda L Crow5, Charlene Cruz1, Maya Monges-Hernadez1, Juemei Wang1, Jaana Hartiala5, Li I Zhang2, Hooman Allayee5, Aldons J Lusis5,6, Takahiro Ohyama7, Rick A Friedman8,9.   

Abstract

This study aimed to investigate the genetic causes of vestibular dysfunction. We used vestibular sensory-evoked potentials (VsEPs) to characterize the vestibular function of 35 inbred mouse strains selected from the Hybrid Mouse Diversity Panel and demonstrated strain-dependent phenotypic variation in vestibular function. Using these phenotypic data, we performed the first genome-wide association study controlling for population structure that has revealed two highly suggestive loci, one of which lies within a haplotype block containing five genes (Stard6, 4930503L19Rik, Poli, Mbd2, Dcc) on Chr. 18 (peak SNP rs29632020), one gene, deleted in colorectal carcinoma (Dcc) has a well-established role in nervous system development. An in-depth analysis of Dcc-deficient mice demonstrated elevation in mean VsEP threshold for Dcc (+/-) mice (-11.86 dB) compared to wild-type (-9.68 dB) littermates. Synaptic ribbon studies revealed Dcc (-/-) (P0) and Dcc (+/-) (6-week-old) mice showed lower density of the presynaptic marker (CtBP2) as compared to wild-type controls. Vestibular ganglion cell counts of Dcc (-/-) (P0) was lower than controls. Whole-mount preparations showed abnormal innervation of the utricle, saccule, and crista ampullaris at E14.5, E16.5, and E18.5. Postnatal studies were limited by the perinatal lethality in Dcc (-/-) mice. Expression analyses using in situ hybridization and immunohistochemistry showed Dcc expression in the mouse vestibular ganglion (E15.5), and utricle and crista ampullaris (6-week-old), respectively. In summary, we report the first GWAS for vestibular functional variation in inbred mice and provide evidence for the role of Dcc in the normal innervation of the peripheral vestibular system.

Entities:  

Keywords:  Hybrid Mouse Diversity Panel; axonal migration; crista; deleted in colorectal carcinoma (Dcc); genome-wide association study; utricle; vestibular ganglia; vestibular sensory evoked potential; vestibular system

Mesh:

Substances:

Year:  2016        PMID: 27539716      PMCID: PMC5023540          DOI: 10.1007/s10162-016-0578-4

Source DB:  PubMed          Journal:  J Assoc Res Otolaryngol        ISSN: 1438-7573


  53 in total

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Authors:  Robert W Eppsteiner; Richard J H Smith
Journal:  Curr Opin Otolaryngol Head Neck Surg       Date:  2011-10       Impact factor: 2.064

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Journal:  Hum Mol Genet       Date:  2011-05-16       Impact factor: 6.150

3.  Deleted in Colorectal Cancer (DCC) encodes a netrin receptor.

Authors:  K Keino-Masu; M Masu; L Hinck; E D Leonardo; S S Chan; J G Culotti; M Tessier-Lavigne
Journal:  Cell       Date:  1996-10-18       Impact factor: 41.582

4.  Deafness and imbalance associated with inactivation of the secretory Na-K-2Cl co-transporter.

Authors:  E Delpire; J Lu; R England; C Dull; T Thorne
Journal:  Nat Genet       Date:  1999-06       Impact factor: 38.330

5.  Hair bundle defects and loss of function in the vestibular end organs of mice lacking the receptor-like inositol lipid phosphatase PTPRQ.

Authors:  Richard J Goodyear; Sherri M Jones; Louise Sharifi; Andy Forge; Guy P Richardson
Journal:  J Neurosci       Date:  2012-02-22       Impact factor: 6.167

6.  A high-resolution association mapping panel for the dissection of complex traits in mice.

Authors:  Brian J Bennett; Charles R Farber; Luz Orozco; Hyun Min Kang; Anatole Ghazalpour; Nathan Siemers; Michael Neubauer; Isaac Neuhaus; Roumyana Yordanova; Bo Guan; Amy Truong; Wen-pin Yang; Aiqing He; Paul Kayne; Peter Gargalovic; Todd Kirchgessner; Calvin Pan; Lawrence W Castellani; Emrah Kostem; Nicholas Furlotte; Thomas A Drake; Eleazar Eskin; Aldons J Lusis
Journal:  Genome Res       Date:  2010-01-06       Impact factor: 9.043

7.  A null mutation of mouse Kcna10 causes significant vestibular and mild hearing dysfunction.

Authors:  Sue I Lee; Travis Conrad; Sherri M Jones; Ayala Lagziel; Matthew F Starost; Inna A Belyantseva; Thomas B Friedman; Robert J Morell
Journal:  Hear Res       Date:  2013-03-22       Impact factor: 3.208

8.  A comparison of vestibular and auditory phenotypes in inbred mouse strains.

Authors:  Sherri M Jones; Timothy A Jones; Kenneth R Johnson; Heping Yu; Lawrence C Erway; Qing Y Zheng
Journal:  Brain Res       Date:  2006-02-24       Impact factor: 3.252

9.  Mouse genome-wide association and systems genetics identify Asxl2 as a regulator of bone mineral density and osteoclastogenesis.

Authors:  Charles R Farber; Brian J Bennett; Luz Orozco; Wei Zou; Ana Lira; Emrah Kostem; Hyun Min Kang; Nicholas Furlotte; Ani Berberyan; Anatole Ghazalpour; Jaijam Suwanwela; Thomas A Drake; Eleazar Eskin; Q Tian Wang; Steven L Teitelbaum; Aldons J Lusis
Journal:  PLoS Genet       Date:  2011-04-07       Impact factor: 5.917

10.  High-Density Genotypes of Inbred Mouse Strains: Improved Power and Precision of Association Mapping.

Authors:  Christoph D Rau; Brian Parks; Yibin Wang; Eleazar Eskin; Petr Simecek; Gary A Churchill; Aldons J Lusis
Journal:  G3 (Bethesda)       Date:  2015-07-28       Impact factor: 3.154

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