Literature DB >> 27539462

Murine Colonic Organoid Culture System and Downstream Assay Applications.

Yang-Yi Fan1, Laurie A Davidson1,2, Robert S Chapkin3,4.   

Abstract

Colonic organoids, three-dimensional colonic crypts grown in vitro that show realistic microanatomy, have many potential applications for studying physiology, developmental biology, and pathophysiology of intestinal diseases including inflammatory bowel disease and colorectal cancer. Here, we describe detailed protocols for mouse colonic crypt isolation, organoid culture, and downstream applications. Specific culture strategies including growth factor enriched Matrigel and Wnt and R-spondin conditioned media serve as key factors for enhancing the growth and cost efficiency of colonic organoid cultures.

Entities:  

Keywords:  In vitro primary culture; Niche-independent crypt expansion; Stem cells

Mesh:

Substances:

Year:  2019        PMID: 27539462      PMCID: PMC5316509          DOI: 10.1007/7651_2016_8

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

1.  Adenylyl cyclase 6 is involved in the hyposecretory status of experimental colitis.

Authors:  Isabel Romero-Calvo; Borja Ocón; Reyes Gámez-Belmonte; Cristina Hernández-Chirlaque; Hugo R de Jonge; Marcel J Bijvelds; Olga Martínez-Augustin; Fermín Sánchez de Medina
Journal:  Pflugers Arch       Date:  2018-08-09       Impact factor: 3.657

2.  AdipoRon Attenuates Wnt Signaling by Reducing Cholesterol-Dependent Plasma Membrane Rigidity.

Authors:  Michael L Salinas; Natividad R Fuentes; Rachel Choate; Rachel C Wright; David N McMurray; Robert S Chapkin
Journal:  Biophys J       Date:  2019-09-16       Impact factor: 4.033

3.  Loss of aryl hydrocarbon receptor suppresses the response of colonic epithelial cells to IL22 signaling by upregulating SOCS3.

Authors:  Huajun Han; Laurie A Davidson; Yang-Yi Fan; Kerstin K Landrock; Arul Jayaraman; Stephen H Safe; Robert S Chapkin
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2021-11-10       Impact factor: 4.052

4.  Role of the Aryl Hydrocarbon Receptor (AhR) in Mediating the Effects of Coffee in the Colon.

Authors:  Robert S Chapkin; Laurie A Davidson; Hyejin Park; Un-Ho Jin; Yang-Yi Fan; Yating Cheng; Martha E Hensel; Kerstin K Landrock; Clinton Allred; Rani Menon; Cory Klemashevich; Arul Jayaraman; Stephen Safe
Journal:  Mol Nutr Food Res       Date:  2021-08-31       Impact factor: 6.575

5.  Loss of aryl hydrocarbon receptor potentiates FoxM1 signaling to enhance self-renewal of colonic stem and progenitor cells.

Authors:  Huajun Han; Laurie A Davidson; Yang-Yi Fan; Jennifer S Goldsby; Grace Yoon; Un-Ho Jin; Gus A Wright; Kerstin K Landrock; Bradley R Weeks; Rachel C Wright; Clinton D Allred; Arul Jayaraman; Ivan Ivanov; Jatin Roper; Stephen H Safe; Robert S Chapkin
Journal:  EMBO J       Date:  2020-08-10       Impact factor: 11.598

6.  Effects of high-fat diet and intestinal aryl hydrocarbon receptor deletion on colon carcinogenesis.

Authors:  Erika L Garcia-Villatoro; Jennifer A A DeLuca; Evelyn S Callaway; Kimberly F Allred; Laurie A Davidson; Martha E Hensel; Rani Menon; Ivan Ivanov; Stephen H Safe; Arul Jayaraman; Robert S Chapkin; Clinton D Allred
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2020-01-06       Impact factor: 4.052

Review 7.  Patient-derived organoid models help define personalized management of gastrointestinal cancer.

Authors:  M R Aberle; R A Burkhart; H Tiriac; S W M Olde Damink; C H C Dejong; D A Tuveson; R M van Dam
Journal:  Br J Surg       Date:  2018-01       Impact factor: 6.939

Review 8.  Application of Organoids in Carcinogenesis Modeling and Tumor Vaccination.

Authors:  Zeyu Wang; Shasha Zhao; Xiaolin Lin; Guanglong Chen; Jiawei Kang; Zhongping Ma; Yiming Wang; Zhi Li; Xiuying Xiao; Aina He; Dongxi Xiang
Journal:  Front Oncol       Date:  2022-03-17       Impact factor: 6.244

9.  A β-Catenin-TCF-Sensitive Locus Control Region Mediates GUCY2C Ligand Loss in Colorectal Cancer.

Authors:  Jeffrey A Rappaport; Ariana A Entezari; Adi Caspi; Signe Caksa; Aakash V Jhaveri; Timothy J Stanek; Adam Ertel; Joan Kupper; Paolo M Fortina; Steven B McMahon; James B Jaynes; Adam E Snook; Scott A Waldman
Journal:  Cell Mol Gastroenterol Hepatol       Date:  2021-12-22
  9 in total

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