Literature DB >> 27535220

Biochemical Characterization of Bifunctional 3-Deoxy-β-d-manno-oct-2-ulosonic Acid (β-Kdo) Transferase KpsC from Escherichia coli Involved in Capsule Biosynthesis.

Olga G Ovchinnikova1, Liam Doyle1, Bo-Shun Huang2, Matthew S Kimber1, Todd L Lowary2, Chris Whitfield3.   

Abstract

3-Deoxy-d-manno-oct-2-ulosonic acid (Kdo) is an essential component of bacterial lipopolysaccharides, where it provides the linkage between lipid and carbohydrate moieties. In all known LPS structures, Kdo residues possess α-anomeric configurations, and the corresponding inverting α-Kdo transferases are well characterized. Recently, it has been shown that a large group of capsular polysaccharides from Gram-negative bacteria, produced by ATP-binding cassette transporter-dependent pathways, are also attached to a lipid anchor through a conserved Kdo oligosaccharide. In the study reported here, the structure of this Kdo linker was determined by NMR spectroscopy, revealing alternating β-(2→4)- and β-(2→7)-linked Kdo residues. KpsC contains two retaining β-Kdo glycosyltransferase domains belonging to family GT99 that are responsible for polymerizing the β-Kdo linker on its glycolipid acceptor. Full-length Escherichia coli KpsC was expressed and purified, together with the isolated N-terminal domain and a mutant protein (KpsC D160A) containing a catalytically inactivated N-terminal domain. The Kdo transferase activities of these proteins were determined in vitro using synthetic acceptors, and the reaction products were characterized using TLC, mass spectrometry, and NMR spectroscopy. The N- and C-terminal domains were found to catalyze formation of β-(2→4) and β-(2→7) linkages, respectively. Based on phylogenetic analyses, we propose the linkage specificities of the glycosyltransferase domains are conserved in KpsC homologs from other bacterial species.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Escherichia coli (E. coli); Kdo; capsular polysaccharide; cell surface; glycoconjugate; glycolipid structure; glycosyltransferase; gram-negative bacteria; oligosaccharide

Mesh:

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Year:  2016        PMID: 27535220      PMCID: PMC5076823          DOI: 10.1074/jbc.M116.751115

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  17 in total

Review 1.  Biosynthesis and assembly of capsular polysaccharides in Escherichia coli.

Authors:  Chris Whitfield
Journal:  Annu Rev Biochem       Date:  2006       Impact factor: 23.643

2.  Evaluation of thioglycosides of Kdo as glycosyl donors.

Authors:  Karin Mannerstedt; Kerstin Ekelöf; Stefan Oscarson
Journal:  Carbohydr Res       Date:  2006-10-09       Impact factor: 2.104

3.  Structure of the K16 antigen from Escherichia coli O7:K16:H-, a Kdo-containing capsular polysaccharide.

Authors:  M Lenter; B Jann; K Jann
Journal:  Carbohydr Res       Date:  1990-03-25       Impact factor: 2.104

4.  Structural and mechanistic analysis of the membrane-embedded glycosyltransferase WaaA required for lipopolysaccharide synthesis.

Authors:  Helgo Schmidt; Guido Hansen; Sonia Singh; Anna Hanuszkiewicz; Buko Lindner; Koichi Fukase; Ronald W Woodard; Otto Holst; Rolf Hilgenfeld; Uwe Mamat; Jeroen R Mesters
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

5.  Conserved glycolipid termini in capsular polysaccharides synthesized by ATP-binding cassette transporter-dependent pathways in Gram-negative pathogens.

Authors:  Lisa M Willis; Jacek Stupak; Michele R Richards; Todd L Lowary; Jianjun Li; Chris Whitfield
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-22       Impact factor: 11.205

6.  Biosynthesis of a novel 3-deoxy-D-manno-oct-2-ulosonic acid-containing outer core oligosaccharide in the lipopolysaccharide of Klebsiella pneumoniae.

Authors:  Emilisa Frirdich; Evgeny Vinogradov; Chris Whitfield
Journal:  J Biol Chem       Date:  2004-04-15       Impact factor: 5.157

7.  KpsC and KpsS are retaining 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) transferases involved in synthesis of bacterial capsules.

Authors:  Lisa M Willis; Chris Whitfield
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-03       Impact factor: 11.205

8.  Genetic and Molecular Basis of Kingella kingae Encapsulation.

Authors:  Kimberly F Starr; Eric A Porsch; Patrick C Seed; Joseph W St Geme
Journal:  Infect Immun       Date:  2016-05-24       Impact factor: 3.441

9.  Comparative genome analysis identifies few traits unique to the Escherichia coli ST131 H30Rx clade and extensive mosaicism at the capsule locus.

Authors:  Abdulaziz Alqasim; Fleming Scheutz; Zhiyong Zong; Alan McNally
Journal:  BMC Genomics       Date:  2014-09-30       Impact factor: 3.969

10.  The carbohydrate-active enzymes database (CAZy) in 2013.

Authors:  Vincent Lombard; Hemalatha Golaconda Ramulu; Elodie Drula; Pedro M Coutinho; Bernard Henrissat
Journal:  Nucleic Acids Res       Date:  2013-11-21       Impact factor: 16.971

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  5 in total

1.  Klebsiella pneumoniae O1 and O2ac antigens provide prototypes for an unusual strategy for polysaccharide antigen diversification.

Authors:  Steven D Kelly; Bradley R Clarke; Olga G Ovchinnikova; Ryan P Sweeney; Monica L Williamson; Todd L Lowary; Chris Whitfield
Journal:  J Biol Chem       Date:  2019-05-28       Impact factor: 5.157

2.  The biosynthetic origin of ribofuranose in bacterial polysaccharides.

Authors:  Steven D Kelly; Danielle M Williams; Jeremy T Nothof; Taeok Kim; Todd L Lowary; Matthew S Kimber; Chris Whitfield
Journal:  Nat Chem Biol       Date:  2022-04-07       Impact factor: 16.174

3.  The retaining β-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.

Authors:  Taylor J B Forrester; Olga G Ovchinnikova; Zhixiong Li; Elena N Kitova; Jeremy T Nothof; Akihiko Koizumi; John S Klassen; Todd L Lowary; Chris Whitfield; Matthew S Kimber
Journal:  Nat Commun       Date:  2022-10-21       Impact factor: 17.694

4.  Exploring the Impact of Ketodeoxynonulosonic Acid in Host-Pathogen Interactions Using Uptake and Surface Display by Nontypeable Haemophilus influenzae.

Authors:  Sudeshna Saha; Alison Coady; Aniruddha Sasmal; Kunio Kawanishi; Biswa Choudhury; Hai Yu; Ricardo U Sorensen; Jaime Inostroza; Ian C Schoenhofen; Xi Chen; Anja Münster-Kühnel; Chihiro Sato; Ken Kitajima; Sanjay Ram; Victor Nizet; Ajit Varki
Journal:  mBio       Date:  2021-01-19       Impact factor: 7.867

5.  A Revised Structure for the Glycolipid Terminus of Escherichia coli K5 Heparosan Capsular Polysaccharide.

Authors:  Lufeng Yan; Li Fu; Ke Xia; Shiguo Chen; Fuming Zhang; Jonathan S Dordick; Robert J Linhardt
Journal:  Biomolecules       Date:  2020-11-06
  5 in total

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