Literature DB >> 27534671

Deep sequencing shows that HBV basal core promoter and precore variants reduce the likelihood of HBsAg loss following tenofovir disoproxil fumarate therapy in HBeAg-positive chronic hepatitis B.

Julianne Bayliss1, Lilly Yuen1, Gillian Rosenberg1, Darren Wong1,2, Margaret Littlejohn1, Kathleen Jackson1, Anuj Gaggar3, Kathryn M Kitrinos3, G Mani Subramanian3, Patrick Marcellin4, Maria Buti5, Harry L A Janssen6, Ed Gane7, Vitina Sozzi1, Danni Colledge1, Rachel Hammond1, Rosalind Edwards1, Stephen Locarnini1, Alexander Thompson2, Peter A Revill1.   

Abstract

OBJECTIVE: Hepatitis B e antigen (HBeAg) seroconversion and hepatitis B surface antigen (HBsAg) loss are important clinical outcomes for patients with chronic hepatitis B (CHB) treated with antiviral therapy. To date, there have been few studies that have evaluated viral sequence markers predicting serological response to nucleos(t)ide analogue (NA) treatment.
DESIGN: We used next-generation sequencing (NGS) and quantitative HBV serology (HBeAg and HBsAg) to identify viral sequence markers associated with serological response to long-term tenofovir disoproxil fumarate therapy among HBeAg-positive patients. In the GS-US-174-0103 study, approximately half the patients seroconverted to anti-HBe by week 192 and 11% of patients exhibited HBsAg loss, the closest outcome to functional cure. The frequency of HBV variants that have previously been associated with HBV clinical outcomes was evaluated. HBV viral diversity in baseline sequences generated by NGS was calculated using Shannon entropy.
RESULTS: NGS analysis of HBV sequences from 157 patients infected with genotypes A to D showed the frequency of variants in the basal core promoter (BCP) and precore (PC) regions varied by genotype and that these mutations were associated with the absence of HBsAg loss. This was the case even when mutations were present at frequencies below the threshold of detection by population sequencing. Increased viral diversity across the HBV genome as determined by NGS was also associated with reduced likelihood of HBsAg loss.
CONCLUSION: Patients with detectable BCP and/or PC variants and higher viral diversity have a lower probability of HBsAg loss during long-term NA therapy. Strategies to achieve functional cure of HBV infection through combination therapy should consider using NGS to stratify patients according to BCP/PC sequence. Consideration should also be given to earlier initiation of therapy prior to the emergence of BCP/PC variants. TRIAL REGISTRATION NUMBER: NCT00116805; Post result. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.

Entities:  

Keywords:  CHRONIC VIRAL HEPATITIS; HEPATITIS B

Mesh:

Substances:

Year:  2016        PMID: 27534671     DOI: 10.1136/gutjnl-2015-309300

Source DB:  PubMed          Journal:  Gut        ISSN: 0017-5749            Impact factor:   23.059


  19 in total

Review 1.  HBV replication inhibitors.

Authors:  Claire Pierra Rouviere; Cyril B Dousson; John E Tavis
Journal:  Antiviral Res       Date:  2020-05-05       Impact factor: 5.970

Review 2.  Use of Current and New Endpoints in the Evaluation of Experimental Hepatitis B Therapeutics.

Authors:  Timothy M Block; Stephen Locarnini; Brian J McMahon; Barbara Rehermann; Marion G Peters
Journal:  Clin Infect Dis       Date:  2017-05-01       Impact factor: 9.079

3.  Analysis of hepatic fibrosis markers in the serum of chronic hepatitis B patients according to basal core promoter/precore mutants.

Authors:  Caroline Lefeuvre; Marine Roux; Simon Blanchard; Hélène Le Guillou-Guillemette; Jérôme Boursier; Françoise Lunel-Fabiani; Pascale Jeannin; Adeline Pivert; Alexandra Ducancelle
Journal:  Sci Rep       Date:  2022-06-17       Impact factor: 4.996

Review 4.  A roadmap for serum biomarkers for hepatitis B virus: current status and future outlook.

Authors:  Anna Kramvis; Kyong-Mi Chang; Maura Dandri; Patrizia Farci; Dieter Glebe; Jianming Hu; Harry L A Janssen; Daryl T Y Lau; Capucine Penicaud; Teresa Pollicino; Barbara Testoni; Florian Van Bömmel; Ourania Andrisani; Maria Beumont-Mauviel; Timothy M Block; Henry L Y Chan; Gavin A Cloherty; William E Delaney; Anna Maria Geretti; Adam Gehring; Kathy Jackson; Oliver Lenz; Mala K Maini; Veronica Miller; Ulrike Protzer; Jenny C Yang; Man-Fung Yuen; Fabien Zoulim; Peter A Revill
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2022-07-20       Impact factor: 73.082

Review 5.  The evolution and clinical impact of hepatitis B virus genome diversity.

Authors:  Peter A Revill; Thomas Tu; Hans J Netter; Lilly K W Yuen; Stephen A Locarnini; Margaret Littlejohn
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2020-05-28       Impact factor: 46.802

6.  Clinical implication and viral mutation in basal core promoter/pre-core of hepatitis B virus C/D recombinant.

Authors:  Hua Li; Qilu She; Yu Liu; Yuehe Ding; Shenghua Shi; Jijie Li; Hongkai Wu; Zhanhui Wang
Journal:  Hepatol Int       Date:  2018-07-24       Impact factor: 6.047

7.  Retrospective-prospective study of safety and efficacy of sofosbuvir-based direct-acting antivirals in HIV/HCV-coinfected participants with decompensated liver disease pre- or post-liver transplant.

Authors:  Marion G Peters; Shyam Kottilil; Norah Terrault; Dominic Amara; Jennifer Husson; Shirish Huprikar; Sander Florman; Mark S Sulkowski; Christine M Durand; Anne F Luetkemeyer; Rodney Rogers; Joshua Grab; Brandy Haydel; Emily Blumberg; Lorna Dove; Jean Emond; Kim Olthoff; Coleman Smith; Thomas Fishbein; Henry Masur; Peter G Stock
Journal:  Am J Transplant       Date:  2020-12-23       Impact factor: 8.086

8.  Evolutionary Analysis of Pre-S/S Mutations in HBeAg-Negative Chronic Hepatitis B With HBsAg < 100 IU/ml.

Authors:  Yingping Wu; Zhiqiang Zhu; Jianyong Wu; Wenzi Bi; Wei Xu; Xiaoping Xia; Dongsheng Han
Journal:  Front Public Health       Date:  2021-04-26

Review 9.  Elimination of Hepatitis B: Is It a Mission Possible?

Authors:  Tai-Chung Tseng; Jia-Horng Kao
Journal:  BMC Med       Date:  2017-03-15       Impact factor: 8.775

Review 10.  Recent Advances in Hepatitis B Treatment.

Authors:  Georgia-Myrto Prifti; Dimitrios Moianos; Erofili Giannakopoulou; Vasiliki Pardali; John E Tavis; Grigoris Zoidis
Journal:  Pharmaceuticals (Basel)       Date:  2021-05-01
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