Literature DB >> 27528751

Cleavage factor Im (CFIm) as a regulator of alternative polyadenylation.

Jessica G Hardy1, Chris J Norbury2.   

Abstract

Most mammalian protein coding genes are subject to alternative cleavage and polyadenylation (APA), which can generate distinct mRNA 3'UTRs with differing regulatory potential. Although this process has been intensely studied in recent years, it remains unclear how and to what extent cleavage site selection is regulated under different physiological conditions. The cleavage factor Im (CFIm) complex is a core component of the mammalian cleavage machinery, and the observation that its depletion causes transcriptome-wide changes in cleavage site use makes it a key candidate regulator of APA. This review aims to summarize current knowledge of the CFIm complex, and explores the evidence surrounding its potential contribution to regulation of APA.
© 2016 The Author(s). published by Portland Press Limited on behalf of the Biochemical Society.

Entities:  

Keywords:  cancer; cell proliferation; gene expression; mRNA biogenesis; polyadenylation; post-transcriptional regulation of gene expression

Mesh:

Substances:

Year:  2016        PMID: 27528751     DOI: 10.1042/BST20160078

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  19 in total

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3.  The HIV-1 capsid-binding host factor CPSF6 is post-transcriptionally regulated by the cellular microRNA miR-125b.

Authors:  Evan Chaudhuri; Sabyasachi Dash; Muthukumar Balasubramaniam; Adrian Padron; Joseph Holland; Gregory A Sowd; Fernando Villalta; Alan N Engelman; Jui Pandhare; Chandravanu Dash
Journal:  J Biol Chem       Date:  2020-03-09       Impact factor: 5.157

4.  RNAcompete methodology and application to determine sequence preferences of unconventional RNA-binding proteins.

Authors:  Debashish Ray; Kevin C H Ha; Kate Nie; Hong Zheng; Timothy R Hughes; Quaid D Morris
Journal:  Methods       Date:  2016-12-10       Impact factor: 3.608

5.  Cellular Cleavage and Polyadenylation Specificity Factor 6 (CPSF6) Mediates Nuclear Import of Human Bocavirus 1 NP1 Protein and Modulates Viral Capsid Protein Expression.

Authors:  Xiaomei Wang; Peng Xu; Fang Cheng; Yi Li; Zekun Wang; Siyuan Hao; Jianke Wang; Kang Ning; Safder S Ganaie; John F Engelhardt; Ziying Yan; Jianming Qiu
Journal:  J Virol       Date:  2020-01-06       Impact factor: 5.103

6.  SRSF3 and SRSF7 modulate 3'UTR length through suppression or activation of proximal polyadenylation sites and regulation of CFIm levels.

Authors:  Oliver Daniel Schwich; Nicole Blümel; Mario Keller; Marius Wegener; Samarth Thonta Setty; Melinda Elaine Brunstein; Ina Poser; Igor Ruiz De Los Mozos; Beatrix Suess; Christian Münch; François McNicoll; Kathi Zarnack; Michaela Müller-McNicoll
Journal:  Genome Biol       Date:  2021-03-11       Impact factor: 13.583

7.  Developmental dynamics of gene expression and alternative polyadenylation in the Caenorhabditis elegans germline.

Authors:  Sean M West; Desirea Mecenas; Michelle Gutwein; David Aristizábal-Corrales; Fabio Piano; Kristin C Gunsalus
Journal:  Genome Biol       Date:  2018-01-24       Impact factor: 13.583

8.  Targeting the polyadenylation factor EhCFIm25 with RNA aptamers controls survival in Entamoeba histolytica.

Authors:  Juan David Ospina-Villa; Alexandre Dufour; Christian Weber; Esther Ramirez-Moreno; Absalom Zamorano-Carrillo; Nancy Guillen; César Lopez-Camarillo; Laurence A Marchat
Journal:  Sci Rep       Date:  2018-04-09       Impact factor: 4.379

9.  CFIm25 inhibits hepatocellular carcinoma metastasis by suppressing the p38 and JNK/c-Jun signaling pathways.

Authors:  Yunwu Wang; Yu Xu; Wei Yan; Ping Han; Jingmei Liu; Jin Gong; Dongxiao Li; Xiangming Ding; Han Wang; Zhuoying Lin; Dean Tian; Jiazhi Liao
Journal:  Oncotarget       Date:  2018-01-31

10.  Ribonucleic acid-binding protein CPSF6 promotes glycolysis and suppresses apoptosis in hepatocellular carcinoma cells by inhibiting the BTG2 expression.

Authors:  Yang Liu; Hongbo Zou; Qichao Xie; Lan Zou; Rui Kong; Bijing Mao
Journal:  Biomed Eng Online       Date:  2021-07-03       Impact factor: 2.819

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