Literature DB >> 27526861

Self-Assembled DNA Hydrogel Based on Enzymatically Polymerized DNA for Protein Encapsulation and Enzyme/DNAzyme Hybrid Cascade Reaction.

Binbin Xiang1, Kaiyu He1, Rong Zhu1, Zhuoliang Liu1, Shu Zeng1, Yan Huang1, Zhou Nie1, Shouzhuo Yao1.   

Abstract

DNA hydrogel is a promising biomaterial for biological and medical applications due to its native biocompatibility and biodegradability. Herein, we provide a novel, versatile, and cost-effective approach for self-assembly of DNA hydrogel using the enzymatically polymerized DNA building blocks. The X-shaped DNA motif was elongated by terminal deoxynucleotidyl transferase (TdT) to form the building blocks, and hybridization between dual building blocks via their complementary TdT-polymerized DNA tails led to gel formation. TdT polymerization dramatically reduced the required amount of original DNA motifs, and the hybridization-mediated cross-linking of building blocks endows the gel with high mechanical strength. The DNA hydrogel can be applied for encapsulation and controllable release of protein cargos (for instance, green fluorescent protein) due to its enzymatic responsive properties. Moreover, this versatile strategy was extended to construct a functional DNAzyme hydrogel by integrating the peroxidase-mimicking DNAzyme into DNA motifs. Furthermore, a hybrid cascade enzymatic reaction system was constructed by coencapsulating glucose oxidase and β-galactosidase into DNAzyme hydrogel. This efficient cascade reaction provides not only a potential method for glucose/lactose detection by naked eye but also a promising modular platform for constructing a multiple enzyme or enzyme/DNAzyme hybrid system.

Entities:  

Keywords:  DNA hydrogel; cascade reaction; multiple-enzyme system; protein encapsulation; self-assembly

Mesh:

Substances:

Year:  2016        PMID: 27526861     DOI: 10.1021/acsami.6b03572

Source DB:  PubMed          Journal:  ACS Appl Mater Interfaces        ISSN: 1944-8244            Impact factor:   9.229


  11 in total

Review 1.  Smart and Functionalized Development of Nucleic Acid-Based Hydrogels: Assembly Strategies, Recent Advances, and Challenges.

Authors:  Yangzi Zhang; Longjiao Zhu; Jingjing Tian; Liye Zhu; Xuan Ma; Xiaoyun He; Kunlun Huang; Fazheng Ren; Wentao Xu
Journal:  Adv Sci (Weinh)       Date:  2021-05-07       Impact factor: 16.806

2.  Intelligent, Biodegradable, and Self-Healing Hydrogels Utilizing DNA Quadruplexes.

Authors:  Shizuma Tanaka; Kenta Wakabayashi; Kazuki Fukushima; Shinsuke Yukami; Ryuki Maezawa; Yuhei Takeda; Kohei Tatsumi; Yuichi Ohya; Akinori Kuzuya
Journal:  Chem Asian J       Date:  2017-08-29

3.  Tuning the Mechanical Properties of a DNA Hydrogel in Three Phases Based on ATP Aptamer.

Authors:  Hengyuan Liu; Tianyang Cao; Yun Xu; Yuanchen Dong; Dongsheng Liu
Journal:  Int J Mol Sci       Date:  2018-05-31       Impact factor: 5.923

4.  Modified Nucleotides as Substrates of Terminal Deoxynucleotidyl Transferase.

Authors:  Daiva Tauraitė; Jevgenija Jakubovska; Julija Dabužinskaitė; Maksim Bratchikov; Rolandas Meškys
Journal:  Molecules       Date:  2017-04-22       Impact factor: 4.411

5.  Control of capillary behavior through target-responsive hydrogel permeability alteration for sensitive visual quantitative detection.

Authors:  Yansheng Li; Yanli Ma; Xiangyu Jiao; Tingyu Li; Zhehao Lv; Chaoyong James Yang; Xueji Zhang; Yongqiang Wen
Journal:  Nat Commun       Date:  2019-03-08       Impact factor: 14.919

6.  Postsynthetic Functionalization of DNA-Nanocomposites with Proteins Yields Bioinstructive Matrices for Cell Culture Applications.

Authors:  Yong Hu; Carmen M Domínguez; Sophina Christ; Christof M Niemeyer
Journal:  Angew Chem Int Ed Engl       Date:  2020-08-26       Impact factor: 15.336

Review 7.  Application of Nucleic Acid Frameworks in the Construction of Nanostructures and Cascade Biocatalysts: Recent Progress and Perspective.

Authors:  Gan Zhu; Ping Song; Jing Wu; Minglan Luo; Zhipeng Chen; Tingjian Chen
Journal:  Front Bioeng Biotechnol       Date:  2022-01-07

Review 8.  Smart Nucleic Acid Hydrogels with High Stimuli-Responsiveness in Biomedical Fields.

Authors:  Jie Li; Yangzi Zhang; Longjiao Zhu; Keren Chen; Xiangyang Li; Wentao Xu
Journal:  Int J Mol Sci       Date:  2022-01-19       Impact factor: 5.923

9.  Application of DNA Quadruplex Hydrogels Prepared from Polyethylene Glycol-Oligodeoxynucleotide Conjugates to Cell Culture Media.

Authors:  Shizuma Tanaka; Shinsuke Yukami; Yuhei Hachiro; Yuichi Ohya; Akinori Kuzuya
Journal:  Polymers (Basel)       Date:  2019-10-02       Impact factor: 4.329

Review 10.  Stimuli-responsive DNA-based hydrogels for biosensing applications.

Authors:  Mengmeng Chen; Yu Wang; Jingyang Zhang; Yuan Peng; Shuang Li; Dianpeng Han; Shuyue Ren; Kang Qin; Sen Li; Zhixian Gao
Journal:  J Nanobiotechnology       Date:  2022-01-21       Impact factor: 10.435

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