Literature DB >> 27525048

Evolution of natural agents: preservation, advance, and emergence of functional information.

Alexei A Sharov1.   

Abstract

Biological evolution is often viewed narrowly as a change of morphology or allele frequency in a sequence of generations. Here I pursue an alternative informational concept of evolution, as preservation, advance, and emergence of functional information in natural agents. Functional information is a network of signs (e.g., memory, transient messengers, and external signs) that are used by agents to preserve and regulate their functions. Functional information is preserved in evolution via complex interplay of copying and construction processes: the digital components are copied, whereas interpreting subagents together with scaffolds, tools, and resources, are constructed. Some of these processes are simple and invariant, whereas others are complex and contextual. Advance of functional information includes improvement and modification of already existing functions. Although the genome information may change passively and randomly, the interpretation is active and guided by the logic of agent behavior and embryonic development. Emergence of new functions is based on the reinterpretation of already existing information, when old tools, resources, and control algorithms are adopted for novel functions. Evolution of functional information progressed from protosemiosis, where signs correspond directly to actions, to eusemiosis, where agents associate signs with objects. Language is the most advanced form of eusemiosis, where the knowledge of objects and models is communicated between agents.

Entities:  

Keywords:  epigenetic inheritance; extended evolutionary synthesis; inclusive heritability; levels of semiosis; plasticity; selective reproduction

Year:  2016        PMID: 27525048      PMCID: PMC4978442          DOI: 10.1007/s12304-015-9250-3

Source DB:  PubMed          Journal:  Biosemiotics        ISSN: 1875-1342            Impact factor:   0.711


  22 in total

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Authors:  Richard O Prum; Alan H Brush
Journal:  Q Rev Biol       Date:  2002-09       Impact factor: 4.875

2.  Human pluripotent stem cells decouple respiration from energy production.

Authors:  Ng Shyh-Chang; Yuxiang Zheng; Jason W Locasale; Lewis C Cantley
Journal:  EMBO J       Date:  2011-12-14       Impact factor: 11.598

3.  Rethinking inheritance, yet again: inheritomes, contextomes and dynamic phenotypes.

Authors:  N G Prasad; Sutirth Dey; Amitabh Joshi; T N C Vidya
Journal:  J Genet       Date:  2015-09       Impact factor: 1.166

Review 4.  The extended evolutionary synthesis: its structure, assumptions and predictions.

Authors:  Kevin N Laland; Tobias Uller; Marcus W Feldman; Kim Sterelny; Gerd B Müller; Armin Moczek; Eva Jablonka; John Odling-Smee
Journal:  Proc Biol Sci       Date:  2015-08-22       Impact factor: 5.349

5.  Protosemiosis: agency with reduced representation capacity.

Authors:  Alexei A Sharov; Tommi Vehkavaara
Journal:  Biosemiotics       Date:  2015-04-01       Impact factor: 0.711

Review 6.  Biosemiotics: a new understanding of life.

Authors:  Marcello Barbieri
Journal:  Naturwissenschaften       Date:  2008-03-26

7.  Neural Darwinism. The Theory of Neuronal Group Selection. Gerald M. Edelman. Basic Books, New York, 1987. xxii, 371 pp., illus. $29.95.

Authors:  W H Calvin
Journal:  Science       Date:  1988-06-24       Impact factor: 47.728

Review 8.  Beyond DNA: integrating inclusive inheritance into an extended theory of evolution.

Authors:  Étienne Danchin; Anne Charmantier; Frances A Champagne; Alex Mesoudi; Benoit Pujol; Simon Blanchet
Journal:  Nat Rev Genet       Date:  2011-06-17       Impact factor: 53.242

9.  Towards a theoretical biology.

Authors:  C H Waddington
Journal:  Nature       Date:  1968-05-11       Impact factor: 49.962

10.  Extended evolution: A conceptual framework for integrating regulatory networks and niche construction.

Authors:  Manfred D Laubichler; Jürgen Renn
Journal:  J Exp Zool B Mol Dev Evol       Date:  2015-06-11       Impact factor: 2.656

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  3 in total

1.  Arbitrariness is not enough: towards a functional approach to the genetic code.

Authors:  Ľudmila Lacková; Vladimír Matlach; Dan Faltýnek
Journal:  Theory Biosci       Date:  2017-05-09       Impact factor: 1.919

2.  Evolutionary biosemiotics and multilevel construction networks.

Authors:  Alexei A Sharov
Journal:  Biosemiotics       Date:  2016-08-16       Impact factor: 0.711

3.  Composite Agency: Semiotics of Modularity and Guiding Interactions.

Authors:  Alexei A Sharov
Journal:  Biosemiotics       Date:  2017-07-27       Impact factor: 0.711

  3 in total

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