Literature DB >> 27515991

Storage by lyophilization - Resulting RNA quality is tissue dependent.

Erin L Damsteegt1, Nicky McHugh2, P Mark Lokman2.   

Abstract

In today's highly collaborative scientific community there is a growing need to transport biological samples across the globe. Lyophilization is a cost-effective preservation method which avoids the use of hazardous chemicals, creating an appealing, yet essentially unexplored, prospect for the long-range transport of animal tissue samples. This study examined the integrity of RNA following its extraction from eel tissue (liver, spleen and ovary) that had been subjected to i) freezing only; ii) freezing and lyophilization, and iii) freezing, lyophilization and subsequent storage at ambient temperature for one week. Only small reductions in RNA integrity were identified in lyophilized, stored sample compared to that of flash-frozen or lyophilized sample not subjected to storage. Reductions in RNA integrity were most profound in ovary tissue, which has a notably higher lipid content (∼35% of dry weight) than liver (∼17%) or spleen (∼15%). However, lowered RNA integrity numbers did not affect qPCR-estimated relative or absolute transcript copy numbers of two arbitrary target genes. These findings confirm that this method is a viable option for shipping animal tissue samples world-wide and could open up numerous benefits for the biological sciences as a whole.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Freeze-dried; Lyophilization; RIN number; RNA quality; RNA storage; qPCR

Mesh:

Substances:

Year:  2016        PMID: 27515991     DOI: 10.1016/j.ab.2016.08.005

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  5 in total

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Authors:  Agnes Molnar; Tamas Lakat; Adam Hosszu; Beata Szebeni; Anna Balogh; Laszlo Orfi; Attila J Szabo; Andrea Fekete; Judit Hodrea
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2.  Stability investigation of air-dried olive ribo nucleic acids for metavirome studies.

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Journal:  Plant Methods       Date:  2022-02-20       Impact factor: 4.993

3.  Long-Term Preservation of SARS-CoV-2 RNA in Silk for Downstream RT-PCR Tests.

Authors:  Raphael Nyaruaba; Wei Hong; Xiaohong Li; Hang Yang; Hongping Wei
Journal:  Anal Chem       Date:  2022-03-02       Impact factor: 6.986

4.  Evaluation of RNA quality and functional transcriptome of beef longissimus thoracis over time post-mortem.

Authors:  Stephanie Lam; Arun Kommadath; Óscar López-Campos; Nuria Prieto; Jennifer Aalhus; Manuel Juárez; Michael E R Dugan; Payam Vahmani
Journal:  PLoS One       Date:  2021-05-25       Impact factor: 3.240

5.  Properties of viable lyopreserved amnion are equivalent to viable cryopreserved amnion with the convenience of ambient storage.

Authors:  Sandeep Dhall; Malathi Sathyamoorthy; Jin-Qiang Kuang; Tyler Hoffman; Matthew Moorman; Anne Lerch; Vimal Jacob; Steven Michael Sinclair; Alla Danilkovitch
Journal:  PLoS One       Date:  2018-10-02       Impact factor: 3.240

  5 in total

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