Literature DB >> 27514039

Robust Retinal Vessel Segmentation via Locally Adaptive Derivative Frames in Orientation Scores.

Jiong Zhang, Behdad Dashtbozorg, Erik Bekkers, Josien P W Pluim, Remco Duits, Bart M Ter Haar Romeny.   

Abstract

This paper presents a robust and fully automatic filter-based approach for retinal vessel segmentation. We propose new filters based on 3D rotating frames in so-called orientation scores, which are functions on the Lie-group domain of positions and orientations [Formula: see text]. By means of a wavelet-type transform, a 2D image is lifted to a 3D orientation score, where elongated structures are disentangled into their corresponding orientation planes. In the lifted domain [Formula: see text], vessels are enhanced by means of multi-scale second-order Gaussian derivatives perpendicular to the line structures. More precisely, we use a left-invariant rotating derivative (LID) frame, and a locally adaptive derivative (LAD) frame. The LAD is adaptive to the local line structures and is found by eigensystem analysis of the left-invariant Hessian matrix (computed with the LID). After multi-scale filtering via the LID or LAD in the orientation score domain, the results are projected back to the 2D image plane giving us the enhanced vessels. Then a binary segmentation is obtained through thresholding. The proposed methods are validated on six retinal image datasets with different image types, on which competitive segmentation performances are achieved. In particular, the proposed algorithm of applying the LAD filter on orientation scores (LAD-OS) outperforms most of the state-of-the-art methods. The LAD-OS is capable of dealing with typically difficult cases like crossings, central arterial reflex, closely parallel and tiny vessels. The high computational speed of the proposed methods allows processing of large datasets in a screening setting.

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Year:  2016        PMID: 27514039     DOI: 10.1109/TMI.2016.2587062

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  35 in total

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Journal:  J Med Syst       Date:  2017-03-11       Impact factor: 4.460

2.  Sensitivity of Cross-Trained Deep CNNs for Retinal Vessel Extraction.

Authors:  Yasmin M Kassim; Richard J Maude; Kannappan Palaniappan
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2018-07

3.  Simultaneous arteriole and venule segmentation with domain-specific loss function on a new public database.

Authors:  Xiayu Xu; Rendong Wang; Peilin Lv; Bin Gao; Chan Li; Zhiqiang Tian; Tao Tan; Feng Xu
Journal:  Biomed Opt Express       Date:  2018-06-15       Impact factor: 3.732

4.  Similarity regularized sparse group lasso for cup to disc ratio computation.

Authors:  Jun Cheng; Zhuo Zhang; Dacheng Tao; Damon Wing Kee Wong; Jiang Liu; Mani Baskaran; Tin Aung; Tien Yin Wong
Journal:  Biomed Opt Express       Date:  2017-07-20       Impact factor: 3.732

5.  Tracking and diameter estimation of retinal vessels using Gaussian process and Radon transform.

Authors:  Masoud Elhami Asl; Navid Alemi Koohbanani; Alejandro F Frangi; Ali Gooya
Journal:  J Med Imaging (Bellingham)       Date:  2017-09-12

6.  Blood vessel segmentation in modern wide-field retinal images in the presence of additive Gaussian noise.

Authors:  Morteza Modarresi Asem; Iman Sheikh Oveisi; Mona Janbozorgi
Journal:  J Med Imaging (Bellingham)       Date:  2018-02-27

7.  Multi-modal and multi-vendor retina image registration.

Authors:  Zhang Li; Fan Huang; Jiong Zhang; Behdad Dashtbozorg; Samaneh Abbasi-Sureshjani; Yue Sun; Xi Long; Qifeng Yu; Bart Ter Haar Romeny; Tao Tan
Journal:  Biomed Opt Express       Date:  2018-01-03       Impact factor: 3.732

8.  3D Shape Modeling and Analysis of Retinal Microvasculature in OCT-Angiography Images.

Authors:  Jiong Zhang; Yuchuan Qiao; Mona Sharifi Sarabi; Maziyar M Khansari; Jin K Gahm; Amir H Kashani; Yonggang Shi
Journal:  IEEE Trans Med Imaging       Date:  2019-10-22       Impact factor: 10.048

9.  Segmentation of retinal blood vessels based on feature-oriented dictionary learning and sparse coding using ensemble classification approach.

Authors:  Navdeep Singh; Lakhwinder Kaur; Kuldeep Singh
Journal:  J Med Imaging (Bellingham)       Date:  2019-11-22

10.  Retinal vessel segmentation using dense U-net with multiscale inputs.

Authors:  Kejuan Yue; Beiji Zou; Zailiang Chen; Qing Liu
Journal:  J Med Imaging (Bellingham)       Date:  2019-09-27
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