Literature DB >> 27504623

Chromosomal Spreading of Microsatellites and (TTAGGG)n Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae).

Marcela B Pucci1, Patricia Barbosa, Viviane Nogaroto, Mara C Almeida, Roberto F Artoni, Priscila C Scacchetti, José C Pansonato-Alves, Fausto Foresti, Orlando Moreira-Filho, Marcelo R Vicari.   

Abstract

Sex chromosome evolution involves the accumulation of repeat sequences such as multigenic families, noncoding repetitive DNA (satellite, minisatellite, and microsatellite), and mobile elements such as transposons and retrotransposons. Most species of Characidium exhibit heteromorphic ZZ/ZW sex chromosomes; the W is characterized by an intense accumulation of repetitive DNA including dispersed satellite DNA sequences and transposable elements. The aim of this study was to analyze the distribution pattern of 18 different tandem repeats, including (GATA)n and (TTAGGG)n, in the genomes of C. zebra and C. gomesi, especially in the C. gomesi W chromosome. In the C. gomesi W chromosome, weak signals were seen for (CAA)10, (CAC)10, (CAT)10, (CGG)10, (GAC)10, and (CA)15 probes. (GA)15 and (TA)15 hybridized to the autosomes but not to the W chromosome. The (GATA)n probe hybridized to the short arms of the W chromosome as well as the (CG)15 probe. The (GATA)n repeat is known to be a protein-binding motif. GATA-binding proteins are necessary for the decondensation of heterochromatic regions that hold coding genes, especially in some heteromorphic sex chromosomes that may keep genes related to oocyte development. The (TAA)10 repeat is accumulated in the entire W chromosome, and this microsatellite accumulation is probably involved in the sex chromosome differentiation process and crossover suppression in C. gomesi. These additional data on the W chromosome DNA composition help to explain the evolution of sex chromosomes in Characidium.
© 2016 S. Karger AG, Basel.

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Year:  2016        PMID: 27504623     DOI: 10.1159/000447959

Source DB:  PubMed          Journal:  Cytogenet Genome Res        ISSN: 1424-8581            Impact factor:   1.636


  8 in total

1.  DNA transposon invasion and microsatellite accumulation guide W chromosome differentiation in a Neotropical fish genome.

Authors:  Michelle Orane Schemberger; Viviane Demetrio Nascimento; Rafael Coan; Érica Ramos; Viviane Nogaroto; Kaline Ziemniczak; Guilherme Targino Valente; Orlando Moreira-Filho; Cesar Martins; Marcelo Ricardo Vicari
Journal:  Chromosoma       Date:  2019-08-27       Impact factor: 4.316

Review 2.  The karyotypes and evolution of ZZ/ZW sex chromosomes in the genus Characidium (Characiformes, Crenuchidae).

Authors:  Marcela Baer Pucci; Viviane Nogaroto; Luiz Antonio Carlos Bertollo; Marcelo Ricardo Vicari
Journal:  Comp Cytogenet       Date:  2018-10-02       Impact factor: 1.800

3.  Evolutionary Insights of the ZW Sex Chromosomesin Snakes: A New Chapter Added by the AmazonianPuffing Snakes of the Genus Spilotes.

Authors:  Patrik F Viana; Tariq Ezaz; Marcelo de Bello Cioffi; Breno Jackson Almeida; Eliana Feldberg
Journal:  Genes (Basel)       Date:  2019-04-09       Impact factor: 4.096

4.  Cytogenetic characterization and mapping of the repetitive DNAs in Cycloramphus bolitoglossus (Werner, 1897): More clues for the chromosome evolution in the genus Cycloramphus (Anura, Cycloramphidae).

Authors:  Gislayne de Paula Bueno; Kaleb Pretto Gatto; Camilla Borges Gazolla; Peterson T Leivas; Michelle M Struett; Maurício Moura; Daniel Pacheco Bruschi
Journal:  PLoS One       Date:  2021-01-13       Impact factor: 3.240

5.  Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis.

Authors:  Kevin Santos da Silva; Larissa Glugoski; Marcelo Ricardo Vicari; Augusto César Paes de Souza; Renata Coelho Rodrigues Noronha; Julio Cesar Pieczarka; Cleusa Yoshiko Nagamachi
Journal:  Front Genet       Date:  2022-03-24       Impact factor: 4.599

6.  Dispersion of transposable elements and multigene families: Microstructural variation in Characidium (Characiformes: Crenuchidae) genomes.

Authors:  Marcela Baer Pucci; Viviane Nogaroto; Orlando Moreira-Filho; Marcelo Ricardo Vicari
Journal:  Genet Mol Biol       Date:  2018-07-16       Impact factor: 1.771

7.  Chromosomes of Asian cyprinid fishes: cytogenetic analysis of two representatives of small paleotetraploid tribe Probarbini.

Authors:  Pasakorn Saenjundaeng; Marcelo de Bello Cioffi; Ezequiel Aguiar de Oliveira; Alongklod Tanomtong; Weerayuth Supiwong; Sumalee Phimphan; Maria João Collares-Pereira; Alexandr Sember; Luiz Antonio Carlos Bertollo; Thomas Liehr; Cassia Fernanda Yano; Terumi Hatanaka; Petr Ráb
Journal:  Mol Cytogenet       Date:  2018-09-04       Impact factor: 2.009

8.  Non-random distribution of microsatellite motifs and (TTAGGG)n repeats in the monkey frog Pithecopus rusticus (Anura, Phyllomedusidae) karyotype.

Authors:  Julia R Ernetti; Camilla B Gazolla; Shirlei M Recco-Pimentel; Elaine M Luca; Daniel P Bruschi
Journal:  Genet Mol Biol       Date:  2020-01-13       Impact factor: 1.771

  8 in total

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