| Literature DB >> 27500074 |
Moones Heidari1, Sam H Gerami1, Brianna Bassett1, Ross M Graham2, Anita C G Chua3, Ritambhara Aryal1, Michael J House4, Joanna F Collingwood5, Conceição Bettencourt6, Henry Houlden7, Mina Ryten8, John K Olynyk9, Debbie Trinder3, Daniel M Johnstone10, Elizabeth A Milward1.
Abstract
We previously demonstrated elevated brain iron levels in myelinated structures and associated cells in a hemochromatosis Hfe (-/-) xTfr2 (mut) mouse model. This was accompanied by altered expression of a group of myelin-related genes, including a suite of genes causatively linked to the rare disease family 'neurodegeneration with brain iron accumulation' (NBIA). Expanded data mining and ontological analyses have now identified additional myelin-related transcriptome changes in response to brain iron loading. Concordance between the mouse transcriptome changes and human myelin-related gene expression networks in normal and NBIA basal ganglia testifies to potential clinical relevance. These analyses implicate, among others, genes linked to various rare central hypomyelinating leukodystrophies and peripheral neuropathies including Pelizaeus-Merzbacher-like disease and Charcot-Marie-Tooth disease as well as genes linked to other rare neurological diseases such as Niemann-Pick disease. The findings may help understand interrelationships of iron and myelin in more common conditions such as hemochromatosis, multiple sclerosis and various psychiatric disorders.Entities:
Keywords: NBIA; array; brain; hemochromatosis; iron; myelin; neurodegeneration; oligodendrocyte
Year: 2016 PMID: 27500074 PMCID: PMC4961263 DOI: 10.1080/21675511.2016.1198458
Source DB: PubMed Journal: Rare Dis ISSN: 2167-5511
Figure 1.Iron labeling by DAB-enhanced Perls' staining in wildtype and HfexTfr2 mouse brain at 3 months of age. Iron is mainly accumulated in myelinated structures and associated cells. Myelin (M), oligodendrocyte (O), blood vessel (V) and black arrows show neurons (N) which do not accumulate appreciable iron even in the HfexTfr2 mouse brain.
Myelin-related genes identified as differentially expressed in i. the HfexTfr2 mice in comparison with wildtype mice and ii. NBIA post-mortem basal ganglia samples compared to neurologically healthy control samples. FC: fold change. Asterisks indicate genes that were not reported as myelin-related genes in our previous paper.
| Gene name and symbol | Function of encoded protein | NBIA case 1 | NBIA case 2 | |
|---|---|---|---|---|
| NBIA-related genes | ||||
| Ferritin, light polypeptide | Iron storage | ↑2.3 (0.0005) | – | – |
| Phospholipase A2, group VI | Fatty acid release from phospholipids | ↓1.60 (0.010) | – | – |
| Fatty acid 2-hydroxylase | 2-hydroxy sphingolipid synthesis | ↓1.41 (0.002) | – | – |
| *Ceruloplasmin | Oxidation of Fe(II) to Fe(III), supports myelination in absence of hephaestin | ↓1.35 (0.013) | – | – |
| Chromosome 19 open reading frame 12 | Fatty acid biogenesis | ↓1.28 (0.023) | – | – |
| ATPase type 13A2 | Ceramide synthesis in lysosomes, phospholipid distribution in myelin | ↓1.17 S(0.047) | – | – |
| Myelin Structure and Biogenesis | ||||
| *Hexose-6-phosphate dehydrogenase | Involved in NADPH production for myelin fatty acid synthesis, strongly enriched in oligodendrocytes | ↓1.67 (0.0004) | – | – |
| Myelin-associated oligodendrocytic basic protein | Major myelin component, compacting and stabilizing the myelin sheath | ↓1.48 (0.0004) | ↓2.60 | ↓2.83 |
| 2′,3′-cyclic nucleotide 3′ phosphodiesterase | Major myelin component, hydrolyzes 2′,3′-cyclic nucleotides to 2′ derivatives | ↓1.27 (0.0033) | – | – |
| Myelin oligodendrocyte glycoprotein | Myelin surface component | ↓1.14 (0.0398) | ↑1.80 | ↑2.44 |
| *Myelin-associated glycoprotein | Myelin-axon interactions | ↓1.13 (0.0301) | ↑2.41 | ↑2.44 |
| Sphingosine-1-phosphate phosphatase 2 | Catalyzes degradation of sphingosine-1-phosphate regenerating sphingosine | ↓1.40 (0.0001) | ↑1.91 | ↑2.06 |
| Neutral sphingomyelinase (N-SMase) activation associated factor | Activation of neutral sphingomyelinase | ↓1.34 (0.0142) | ↑1.52 | ↑2.36 |
| Sphingomyelin phosphodiesterase | Converts sphingomyelin to ceramide | ↓1.25 (0.0001) | ↑2.40 | – |
| *Prosaposin | Sphingolipid activation | ↓1.16 (0.0043) | ↓1.82 | ↑1.57 |
| *Cytochrome P450, family 51 | Involved in cholesterol synthesis required for myelination | ↓1.13 (0.0261) | – | – |
| Reticulon 4 | Myelin outgrowth inhibitor | ↓1.33 (0.034) | – | – |
| Oligodendrocyte specific protein/claudin 11 | Myelin compaction | ↓1.13 (0.0127) | – | – |
| Gap junction protein, gamma 2 | Gap junction protein with roles in myelination, mutation causes progressive leukodystrophy | ↓1.27 (0.0052) | ↓2.47 | ↓2.87 |
| Tetraspanin 2 | Involved in oligodendrocyte differentiation to generate myelin, stabilizes myelin | ↓1.22 (0.0238) | – | – |
| *Heat shock 60 kDa protein 1 | Involved in myelin development, mutation causes hypomyelinating leukodystrophy | ↓1.31 (0.0004) | – | ↓2.01 |
| *Annexin A2 | Involved in paranodal regions in peripheral myelin, induces membrane budding and lipid segregation | ↓1.11 (0.0184) | ↑1.70 | ↑1.60 |
| *Multiple PDZ domain protein | Involved in oligodendrocyte-astrocyte gap junctions and tight junctions in myelinating Schwann cells | ↓1.16 (0.0229) | – | ↑1.62 |
| *Exocyst complex component 4 | Regulates transport of myelin proteins to site of membrane growth in oligodendrocytes and Schwann cells | ↓1.16 (0.0464) | – | – |
| *Aldo-keto reductase family 1, member B1 | Present in myelin, catalyzes NADPH-dependent reduction of glucose to sorbitol, implicated in diabetic neuropathy | ↑1.20 (0.0111) | – | – |
| Other myelin-related functions | ||||
| *Klotho | Enhances oligodendrocyte maturation and myelination | ↓1.38 (0.0003) | – | – |
| Transferrin | Iron transport and | ↓1.33 (0.00002) | – | ↑1.98 |
| *Solute carrier family 12, member 6 | Myelin development, mutation causes agenesis of the corpus callosum | ↓1.29 (0.0180) | – | – |
| Histamine receptor H3 | Myelin component, involved in experimental autoimmune encephalomyelitis (EAE) development | ↓1.25 (0.041) | – | – |
| Ring finger protein 10 | Transcriptional regulation of the myelin-associated glycoprotein gene | ↓1.21 (0.0448) | ↑1.91 | – |
| Tumor necrosis factor receptor superfamily, member 21 | Negatively regulates oligodendrocyte survival, maturation and myelination | ↓1.50 (0.0029) | ↓4.25 | ↓1.85 |
| Leucine rich repeat and Ig domain containing 1 | Negatively regulates myelination | ↓1.20 (0.0169) | – | – |
| *Myotubularin related protein 2 | Negatively regulates membrane formation in Schwann cells, linked to Charcot-Marie-Tooth disease type 4B1 | ↓1.19 (0.0489) | ↓1.58 | – |
| *Superoxide dismutase 1, soluble | Oligodendrocyte maturation, linked to amyotrophic lateral sclerosis | ↑1.12 (0.0366) | ↓2.31 | ↑1.52 |
| *Beta-site APP-cleaving enzyme 1 | Enhances myelination, cleaves the amyloid precursor protein at the β-secretase site | ↓1.10 (0.0117) | – | – |
| *Kallikrein-related peptidase 8 | Demyelination and oligodendrocyte death in experimental allergic encephalomyelitis (EAE) is attenuated in | ↑1.22 (0.0183) | – | – |
| Ganglioside induced differentiation associated protein 1 | Mitochondrial fission factor, | ↓1.12 (0.0380) | – | – |
| *Fibroblast growth factor receptor 3 | Regulates oligodendrocyte terminal differentiation and timing of myelination, regulates injury-related effects in the peripheral nervous system | ↓1.27 (0.0382) | – | ↓6.24 |
| *Neurotrophic tyrosine kinase, receptor, type 2 | Regulates CNS myelination and progenitor cell proliferation through its ligand, brain derived neurotrophic factor (BDNF) | ↓1.16 (0.0331) | – | – |
| *SRY (sex determining region Y)-box 17 | Regulates oligodendrocyte progenitor cell cycle exit and differentiation, oligodendrocyte survival | ↓1.74 (0.0426) | – | – |
Some important myelin-related genes identified as differentially expressed in NBIA post-mortem basal ganglia samples compared to neurologically healthy control samples (asterisks indicate newly identified genes).
| Gene name and symbol | NBIA case 1 | NBIA case 2 |
|---|---|---|
| NBIA-related genes | ||
| *Pantothenate kinase 2 | ↓3.80 | ↑1.56 |
| *WD repeat domain 4 | ↑1.99 | ↑1.56 |
| Myelin Structure and Biogenesis | ||
| Myelin basic protein | ↑2.33 | ↑1.82 |
| *Mal T-cell differentiation protein | ↑1.94 | ↑3.23 |
| Oligodendrocyte myelin glycoprotein | ↑1.89 | ↑2.35 |
| *Proteolipid protein 1 | – | ↑4.1 |
| Other myelin-related functions | ||
| Oligodendrocytic myelin paranodal and inner loop protein | ↑2.70 | ↑3.30 |
| *Dicer 1 ribonuclease III | ↑2.53 | ↑3.51 ↓1.68 |
| *B-cell CLL/lymphoma 2 | ↑2.52 | – |
| *Achaete-scute family bHLH transcription factor 1 | ↑2.30 | – |
| *Niemann-Pick disease, type C1 | ↑2.13 | ↑4.08 |
| Peripheral myelin protein 2 | – | ↑1.61 |
| Myelin transcription factor 1 | – | ↓3.70 |