Literature DB >> 27499077

Herbivorax saccincola gen. nov., sp. nov., a cellulolytic, anaerobic, thermophilic bacterium isolated via in sacco enrichments from a lab-scale biogas reactor.

Daniela E Koeck1, Matthias Mechelke1, Vladimir V Zverlov1,2, Wolfgang Liebl1, Wolfgang H Schwarz1.   

Abstract

A novel Gram-stain-positive, rod-shaped, anaerobic, thermophilic bacterium, strain GGR1T, was isolated from a thermophilic lab-scale biogas fermenter. The novel organism was effectively degrading crystalline cellulose. It seems to play a role in remineralization of plant biomass by hydrolysing its polysaccharides. 16S rRNA gene comparative sequence analysis demonstrated that the isolate formed a hitherto unknown subline within the family Ruminococcaceae. The closest phylogenetic relative of GGR1T among the taxa with validly published names was Clostridiumthermocellum, sharing 94.3 % 16S rRNA gene sequence similarity. Strain GGR1T was catalase-negative, indole-negative and produced acetate and ethanol as major end-products during fermentative cellulose utilization. The major cellular fatty acids (>1 %) were 16 : 0 iso fatty acid and 16 : 0 fatty acid. Cells were rod shaped and grew optimally at 60 °C and pH 7.0. The DNA G+C content was 34.9 mol%. A novel genus and species, Herbivoraxsaccincola gen. nov., sp. nov., is proposed on the basis of phylogenetic analysis and physiological properties of the novel isolate. Strain GGR1T (=DSM 101079T=CECT 9155T) represents the type strain for the novel genus and novel species Herbivoraxsaccincola gen. nov., sp. nov.

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Year:  2016        PMID: 27499077     DOI: 10.1099/ijsem.0.001374

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Identification of parameters needed for optimal anaerobic co-digestion of chicken manure and corn stover.

Authors:  Yilong Yan; Ziwen Du; Liqiu Zhang; Li Feng; Dezhi Sun; Yan Dang; Dawn E Holmes; Jessica A Smith
Journal:  RSC Adv       Date:  2019-09-19       Impact factor: 4.036

2.  Complete Genome Sequence of the Novel Cellulolytic, Anaerobic, Thermophilic Bacterium Herbivorax saccincola Type Strain GGR1, Isolated from a Lab Scale Biogas Reactor as Established by Illumina and Nanopore MinION Sequencing.

Authors:  Alexander Pechtl; Christian Rückert; Irena Maus; Daniela E Koeck; Nataliya Trushina; Petra Kornberger; Wolfgang H Schwarz; Andreas Schlüter; Wolfgang Liebl; Vladimir V Zverlov
Journal:  Genome Announc       Date:  2018-02-08

3.  Creation of a functional hyperthermostable designer cellulosome.

Authors:  Amaranta Kahn; Sarah Moraïs; Anastasia P Galanopoulou; Daehwan Chung; Nicholas S Sarai; Neal Hengge; Dimitris G Hatzinikolaou; Michael E Himmel; Yannick J Bomble; Edward A Bayer
Journal:  Biotechnol Biofuels       Date:  2019-02-28       Impact factor: 6.040

Review 4.  Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants.

Authors:  Julia Hassa; Irena Maus; Sandra Off; Alfred Pühler; Paul Scherer; Michael Klocke; Andreas Schlüter
Journal:  Appl Microbiol Biotechnol       Date:  2018-04-30       Impact factor: 4.813

5.  Addition of β-galactosidase boosts the xyloglucan degradation capability of endoglucanase Cel9D from Clostridium thermocellum.

Authors:  Jonathan Herlet; Wolfgang H Schwarz; Vladimir V Zverlov; Wolfgang Liebl; Petra Kornberger
Journal:  Biotechnol Biofuels       Date:  2018-09-04       Impact factor: 6.040

  5 in total

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