Literature DB >> 27498089

A discriminative feature selection approach for shape analysis: Application to fetal brain cortical folding.

J Pontabry1, F Rousseau2, C Studholme3, M Koob4, J-L Dietemann4.   

Abstract

The development of post-processing reconstruction techniques has opened new possibilities for the study of in-utero fetal brain MRI data. Recent cortical surface analysis have led to the computation of quantitative maps characterizing brain folding of the developing brain. In this paper, we describe a novel feature selection-based approach that is used to extract the most discriminative and sparse set of features of a given dataset. The proposed method is used to sparsely characterize cortical folding patterns of an in-utero fetal MR dataset, labeled with heterogeneous gestational age ranging from 26 weeks to 34 weeks. The proposed algorithm is validated on a synthetic dataset with both linear and non-linear dynamics, supporting its ability to capture deformation patterns across the dataset within only a few features. Results on the fetal brain dataset show that the temporal process of cortical folding related to brain maturation can be characterized by a very small set of points, located in anatomical regions changing across time. Quantitative measurements of growth against time are extracted from the set selected features to compare multiple brain regions (e.g. lobes and hemispheres) during the considered period of gestation.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Brain development; Feature selection; Fetal imaging; Structural MRI

Mesh:

Year:  2016        PMID: 27498089      PMCID: PMC5501094          DOI: 10.1016/j.media.2016.07.005

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  39 in total

1.  "Sulcal root" generic model: a hypothesis to overcome the variability of the human cortex folding patterns.

Authors:  Jean Régis; Jean-François Mangin; Taku Ochiai; Vincent Frouin; Denis Riviére; Arnaud Cachia; Manabu Tamura; Yves Samson
Journal:  Neurol Med Chir (Tokyo)       Date:  2005-01       Impact factor: 1.742

2.  Geodesic estimation for large deformation anatomical shape averaging and interpolation.

Authors:  Brian Avants; James C Gee
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

Review 3.  Ontogeny of the human central nervous system: what is happening when?

Authors:  Victorine B de Graaf-Peters; Mijna Hadders-Algra
Journal:  Early Hum Dev       Date:  2005-12-19       Impact factor: 2.079

4.  A novel parametric method for non-rigid image registration.

Authors:  Anne Cuzol; Pierre Hellier; Etienne Mémin
Journal:  Inf Process Med Imaging       Date:  2005

5.  A pattern-theoretic characterization of biological growth.

Authors:  Ulf Grenander; Anuj Srivastava; Sanjay Saini
Journal:  IEEE Trans Med Imaging       Date:  2007-05       Impact factor: 10.048

6.  A combined manifold learning analysis of shape and appearance to characterize neonatal brain development.

Authors:  P Aljabar; R Wolz; L Srinivasan; S J Counsell; M A Rutherford; A D Edwards; J V Hajnal; D Rueckert
Journal:  IEEE Trans Med Imaging       Date:  2011-07-22       Impact factor: 10.048

7.  Early folding patterns and asymmetries of the normal human brain detected from in utero MRI.

Authors:  Piotr A Habas; Julia A Scott; Ahmad Roosta; Vidya Rajagopalan; Kio Kim; Francois Rousseau; A James Barkovich; Orit A Glenn; Colin Studholme
Journal:  Cereb Cortex       Date:  2011-05-12       Impact factor: 5.357

8.  MR imaging of the fetus by a HASTE sequence.

Authors:  Y Yamashita; T Namimoto; Y Abe; M Takahashi; J Iwamasa; K Miyazaki; H Okamura
Journal:  AJR Am J Roentgenol       Date:  1997-02       Impact factor: 3.959

9.  Are Developmental Trajectories of Cortical Folding Comparable Between Cross-sectional Datasets of Fetuses and Preterm Newborns?

Authors:  Julien Lefèvre; David Germanaud; Jessica Dubois; François Rousseau; Ines de Macedo Santos; Hugo Angleys; Jean-François Mangin; Petra S Hüppi; Nadine Girard; François De Guio
Journal:  Cereb Cortex       Date:  2015-06-03       Impact factor: 5.357

10.  Atlas-based segmentation of developing tissues in the human brain with quantitative validation in young fetuses.

Authors:  Piotr A Habas; Kio Kim; Francois Rousseau; Orit A Glenn; A James Barkovich; Colin Studholme
Journal:  Hum Brain Mapp       Date:  2010-09       Impact factor: 5.038

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