Literature DB >> 27497723

Comparison of the homogeneity of mRNAs encoding SFRP5, FZD4, and Fosl1 in post-injury intervals: Subcellular localization of markers may influence wound age estimation.

Xi-Yan Zhu1, Qiu-Xiang Du1, San-Qiang Li1, Jun-Hong Sun2.   

Abstract

The inter-group heterogeneity and intra-group homogeneity of relative expression are very necessary when the mRNA were used to determine wound age accurately in forensic medicine. The aim of this study was to assess the intra-group homogeneity of SFRP5, FZD4 and Fosl1 mRNAs in post-injury intervals. The corresponding proteins show different subcellular locations. A total of 78 Sprague-Dawley rats were divided into control and contusion groups. At 4, 8, 12, 16, 20, 24, 28, 32, 36, 40, 44, or 48 h (n = 6 per group) after contusion (under anesthesia by chloral hydrate intraperitoneally), the rats were sacrificed using a lethal dose of pentobarbital, and samples of the injured muscles were collected. The raw Ct values of SFRP5, FZD4, and Fosl1 mRNAs were obtained using real-time PCR. After normalized to RPL13 mRNA levels, the coefficient of variation (CV) and the relative average deviation (d%) of each normalized Ct, and their relative expression levels, were calculated in each post-injury interval. Two methods were applied to compare the homogeneity of the three genes. First, each gene was given a score based on its CV value in each post-injury interval. Then, the sum of the 13 scores was calculated; a low sum indicated high homogeneity. Second, the 13 calculated CVs or d%s were used as raw data, which was described as the mean ± SD. Based on this mean ± SD, a CV of the CVs and a d% of the d%s were calculated to represent the variation; a low value indicated high homogeneity. The sum of the variability of FZD4 mRNA was lower than those of the SFRP5 and Fosl1 mRNAs, consistent with the results that the FZD4 mRNA had the lowest mean, the smallest CV of all CVs, and the smallest d% of all d%s, among the three genes. In conclusion, these data indicated that mRNA encoding membranous FZD4 was likely to be more homogeneous than those encoding SFRP5 and Fosl1 within post-injury intervals.
Copyright © 2016 Elsevier Ltd and Faculty of Forensic and Legal Medicine. All rights reserved.

Entities:  

Keywords:  Intra-group homogeneity; Marker; Real-time PCR; Subcellular location; Wound age estimation

Mesh:

Substances:

Year:  2016        PMID: 27497723     DOI: 10.1016/j.jflm.2016.07.013

Source DB:  PubMed          Journal:  J Forensic Leg Med        ISSN: 1752-928X            Impact factor:   1.614


  6 in total

1.  Temporal expression of wound healing-related genes inform wound age estimation in rats after a skeletal muscle contusion: a multivariate statistical model analysis.

Authors:  Qiu-Xiang Du; Na Li; Li-Hong Dang; Ta-Na Dong; Han-Lin Lu; Fu-Xia Shi; Qian-Qian Jin; Cao Jie; Jun-Hong Sun
Journal:  Int J Legal Med       Date:  2019-01-11       Impact factor: 2.686

Review 2.  The Role of miRNAs as New Molecular Biomarkers for Dating the Age of Wound Production: A Systematic Review.

Authors:  Stefania De Simone; Elena Giacani; Maria Antonella Bosco; Simona Vittorio; Michela Ferrara; Giuseppe Bertozzi; Luigi Cipolloni; Raffaele La Russa
Journal:  Front Med (Lausanne)       Date:  2022-01-14

3.  Analysis of sensitivity and specificity: precise recognition of neutrophils during regeneration of contused skeletal muscle in rats.

Authors:  Jiajia Niu; Guoshuai An; Zhen Gu; Peng Li; Qiqing Liu; Rufeng Bai; Junhong Sun; Qiuxiang Du
Journal:  Forensic Sci Res       Date:  2020-03-19

4.  Investigating Transcriptional Dynamics Changes and Time-Dependent Marker Gene Expression in the Early Period After Skeletal Muscle Injury in Rats.

Authors:  Kang Ren; Liangliang Wang; Liang Wang; Qiuxiang Du; Jie Cao; Qianqian Jin; Guoshuai An; Na Li; Lihong Dang; Yingjie Tian; Yingyuan Wang; Junhong Sun
Journal:  Front Genet       Date:  2021-06-17       Impact factor: 4.599

Review 5.  Vitality and wound-age estimation in forensic pathology: review and future prospects.

Authors:  Na Li; Qiuxiang Du; Rufeng Bai; Junhong Sun
Journal:  Forensic Sci Res       Date:  2018-03-29

Review 6.  State-of-the-Art on Wound Vitality Evaluation: A Systematic Review.

Authors:  Aniello Maiese; Alice Chiara Manetti; Naomi Iacoponi; Eleonora Mezzetti; Emanuela Turillazzi; Marco Di Paolo; Raffaele La Russa; Paola Frati; Vittorio Fineschi
Journal:  Int J Mol Sci       Date:  2022-06-21       Impact factor: 6.208

  6 in total

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