Literature DB >> 27496773

Carbon Catabolite Repression and Impranil Polyurethane Degradation in Pseudomonas protegens Strain Pf-5.

Chia-Suei Hung1, Sandra Zingarelli1, Lloyd J Nadeau2, Justin C Biffinger3, Carrie A Drake1, Audra L Crouch1, Daniel E Barlow3, John N Russell3, Wendy J Crookes-Goodson4.   

Abstract

Polyester polyurethane (PU) coatings are widely used to help protect underlying structural surfaces but are susceptible to biological degradation. PUs are susceptible to degradation by Pseudomonas species, due in part to the degradative activity of secreted hydrolytic enzymes. Microorganisms often respond to environmental cues by secreting enzymes or secondary metabolites to benefit their survival. This study investigated the impact of exposing several Pseudomonas strains to select carbon sources on the degradation of the colloidal polyester polyurethane Impranil DLN (Impranil). The prototypic Pseudomonas protegens strain Pf-5 exhibited Impranil-degrading activities when grown in sodium citrate but not in glucose-containing medium. Glucose also inhibited the induction of Impranil-degrading activity by citrate-fed Pf-5 in a dose-dependent manner. Biochemical and mutational analyses identified two extracellular lipases present in the Pf-5 culture supernatant (PueA and PueB) that were involved in degradation of Impranil. Deletion of the pueA gene reduced Impranil-clearing activities, while pueB deletion exhibited little effect. Removal of both genes was necessary to stop degradation of the polyurethane. Bioinformatic analysis showed that putative Cbr/Hfq/Crc-mediated regulatory elements were present in the intergenic sequences upstream of both pueA and pueB genes. Our results confirmed that both PueA and PueB extracellular enzymes act in concert to degrade Impranil. Furthermore, our data showed that carbon sources in the growth medium directly affected the levels of Impranil-degrading activity but that carbon source effects varied among Pseudomonas strains. This study uncovered an intricate and complicated regulation of P. protegens PU degradation activity controlled by carbon catabolite repression. IMPORTANCE: Polyurethane (PU) coatings are commonly used to protect metals from corrosion. Microbiologically induced PU degradation might pose a substantial problem for the integrity of these coatings. Microorganisms from diverse genera, including pseudomonads, possess the ability to degrade PUs via various means. This work identified two extracellular lipases, PueA and PueB, secreted by P. protegens strain Pf-5, to be responsible for the degradation of a colloidal polyester PU, Impranil. This study also revealed that the expression of the degradative activity by strain Pf-5 is controlled by glucose carbon catabolite repression. Furthermore, this study showed that the Impranil-degrading activity of many other Pseudomonas strains could be influenced by different carbon sources. This work shed light on the carbon source regulation of PU degradation activity among pseudomonads and identified the polyurethane lipases in P. protegens.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 27496773      PMCID: PMC5068165          DOI: 10.1128/AEM.01448-16

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  38 in total

1.  Genetic recombination in Pseudomonas aeruginosa.

Authors:  B W HOLLOWAY
Journal:  J Gen Microbiol       Date:  1955-12

2.  Regulation of extracellular protease secretion in Pseudomonas maltophilia.

Authors:  R S Boethling
Journal:  J Bacteriol       Date:  1975-09       Impact factor: 3.490

3.  Influence of iron(III) and pyoverdine on extracellular proteinase and lipase production by Pseudomonas fluorescens B52.

Authors:  R C McKellar; K Shamsuzzaman; C San Jose; H Cholette
Journal:  Arch Microbiol       Date:  1987-04       Impact factor: 2.552

4.  Peroxiredoxin-6 protects against mitochondrial dysfunction and liver injury during ischemia-reperfusion in mice.

Authors:  Thorsten Eismann; Nadine Huber; Thomas Shin; Satoshi Kuboki; Elizabeth Galloway; Michael Wyder; Michael J Edwards; Kenneth D Greis; Howard G Shertzer; Aron B Fisher; Alex B Lentsch
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2008-11-25       Impact factor: 4.052

5.  Survival of rifampin-resistant mutants of Pseudomonas fluorescens and Pseudomonas putida in soil systems.

Authors:  G Compeau; B J Al-Achi; E Platsouka; S B Levy
Journal:  Appl Environ Microbiol       Date:  1988-10       Impact factor: 4.792

6.  Using Pseudomonas spp. for Integrated Biological Control.

Authors:  Virginia O Stockwell; James P Stack
Journal:  Phytopathology       Date:  2007-02       Impact factor: 4.025

7.  PRODUCTION OF LIPASE BY PSEUDOMONAS FRAGI IN A SYNTHETIC MEDIUM.

Authors:  J A ALFORD; D A PIERCE
Journal:  J Bacteriol       Date:  1963-07       Impact factor: 3.490

8.  Effect of insertional mutations in the pueA and pueB genes encoding two polyurethanases in Pseudomonas chlororaphis contained within a gene cluster.

Authors:  G T Howard; R I Mackie; I K O Cann; S Ohene-Adjei; K S Aboudehen; B G Duos; G W Childers
Journal:  J Appl Microbiol       Date:  2007-12       Impact factor: 3.772

9.  Characterization of an extracellular lipase and its chaperone from Ralstonia eutropha H16.

Authors:  Jingnan Lu; Christopher J Brigham; Chokyun Rha; Anthony J Sinskey
Journal:  Appl Microbiol Biotechnol       Date:  2012-05-16       Impact factor: 4.813

10.  Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5.

Authors:  Ian T Paulsen; Caroline M Press; Jacques Ravel; Donald Y Kobayashi; Garry S A Myers; Dmitri V Mavrodi; Robert T DeBoy; Rekha Seshadri; Qinghu Ren; Ramana Madupu; Robert J Dodson; A Scott Durkin; Lauren M Brinkac; Sean C Daugherty; Stephen A Sullivan; Mary J Rosovitz; Michelle L Gwinn; Liwei Zhou; Davd J Schneider; Samuel W Cartinhour; William C Nelson; Janice Weidman; Kisha Watkins; Kevin Tran; Hoda Khouri; Elizabeth A Pierson; Leland S Pierson; Linda S Thomashow; Joyce E Loper
Journal:  Nat Biotechnol       Date:  2005-06-26       Impact factor: 54.908

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  14 in total

Review 1.  Functional interplay between plastic polymers and microbes: a comprehensive review.

Authors:  Sukhendu Maity; Sambuddha Banerjee; Chayan Biswas; Rajkumar Guchhait; Ankit Chatterjee; Kousik Pramanick
Journal:  Biodegradation       Date:  2021-06-04       Impact factor: 3.909

2.  Meeting report of the third annual Tri-Service Microbiome Consortium symposium.

Authors:  J Philip Karl; Robyn A Barbato; Laurel A Doherty; Aarti Gautam; Sarah M Glaven; Robert J Kokoska; Dagmar Leary; Rebecca L Mickol; Matthew A Perisin; Andrew J Hoisington; Edward J Van Opstal; Vanessa Varaljay; Nancy Kelley-Loughnane; Camilla A Mauzy; Michael S Goodson; Jason W Soares
Journal:  Environ Microbiome       Date:  2020-07-13

Review 3.  Microbial biodegradation of plastics: Challenges, opportunities, and a critical perspective.

Authors:  Nitai Basak; Sumer Singh Meena
Journal:  Front Environ Sci Eng       Date:  2022-07-15

4.  Metabolic reconstruction of Pseudomonas chlororaphis ATCC 9446 to understand its metabolic potential as a phenazine-1-carboxamide-producing strain.

Authors:  Fabián Moreno-Avitia; José Utrilla; Francisco Bolívar; Juan Nogales; Adelfo Escalante
Journal:  Appl Microbiol Biotechnol       Date:  2020-09-28       Impact factor: 4.813

5.  Finished Genome Sequence of a Polyurethane-Degrading Pseudomonas Isolate.

Authors:  Blake W Stamps; Sandra Zingarelli; Chia-Suei Hung; Carrie A Drake; Vanessa A Varaljay; Bradley S Stevenson; Wendy J Crookes-Goodson
Journal:  Genome Announc       Date:  2018-03-01

Review 6.  Plastics: Environmental and Biotechnological Perspectives on Microbial Degradation.

Authors:  Dominik Danso; Jennifer Chow; Wolfgang R Streit
Journal:  Appl Environ Microbiol       Date:  2019-09-17       Impact factor: 4.792

7.  Agar plate-based screening methods for the identification of polyester hydrolysis by Pseudomonas species.

Authors:  Rebecka Molitor; Alexander Bollinger; Sonja Kubicki; Anita Loeschcke; Karl-Erich Jaeger; Stephan Thies
Journal:  Microb Biotechnol       Date:  2019-04-23       Impact factor: 5.813

8.  Meeting report of the third annual Tri-Service Microbiome Consortium symposium.

Authors:  J Philip Karl; Robyn A Barbato; Laurel A Doherty; Aarti Gautam; Sarah M Glaven; Robert J Kokoska; Dagmar Leary; Rebecca L Mickol; Matthew A Perisin; Andrew J Hoisington; Edward J Van Opstal; Vanessa Varaljay; Nancy Kelley-Loughnane; Camilla A Mauzy; Michael S Goodson; Jason W Soares
Journal:  Environ Microbiome       Date:  2020-07-13

9.  A Cyclic Metabolic Network in Pseudomonas protegens Pf-5 Prioritizes the Entner-Doudoroff Pathway and Exhibits Substrate Hierarchy during Carbohydrate Co-Utilization.

Authors:  Rebecca A Wilkes; Caroll M Mendonca; Ludmilla Aristilde
Journal:  Appl Environ Microbiol       Date:  2018-12-13       Impact factor: 4.792

10.  Toward Biorecycling: Isolation of a Soil Bacterium That Grows on a Polyurethane Oligomer and Monomer.

Authors:  María José Cárdenas Espinosa; Andrea Colina Blanco; Tabea Schmidgall; Anna Katharina Atanasoff-Kardjalieff; Uwe Kappelmeyer; Dirk Tischler; Dietmar H Pieper; Hermann J Heipieper; Christian Eberlein
Journal:  Front Microbiol       Date:  2020-03-27       Impact factor: 5.640

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