Literature DB >> 27491851

Evolution of the hydrogen-bonding motif in the melamine-cyanuric acid co-crystal: a topological study.

Andre N Petelski1,2, Nelida M Peruchena3,2, Gladis L Sosa4,5.   

Abstract

The melamine (M)/cyanuric acid (CA) supramolecular system is perhaps one of the most exploited in the field of self-assembly because of the high complementarity of the components. However, it is necessary to investigate further the factors involved in the assembly process. In this study, we analyzed a set of 13 M n /CA m clusters (with n , m = 1, 2, 3), taken from crystallographic data, to characterize the nature of the hydrogen bonds involved in the self-assembly of these components as well as to provide greater understanding of the phenomenon. The calculations were performed at the B3LYP/6-311++G(d,p) and ω-B97XD (single point) levels of theory, and the interactions were analyzed within the framework of the quantum theory of atoms in molecules and by means of molecular electrostatic potential maps. Our results show that the stablest structure is the rosette-type motif and the aggregation mechanism is governed by a combination of cooperative and anticooperative effects. Our topological results explain the polymorphism in the self-assembly of coadsorbed monolayers of M and CA. Graphical abstract The aggregation steps of the melamine-cyanuric co-crystal is driven by a hydrogen-bonded network which is governed by a complex combination of cooperative and anticooperative effects.

Entities:  

Keywords:  Hydrogen bonds; Negative cooperativity; Rosette motif; Self-assembly; Supramolecular

Year:  2016        PMID: 27491851     DOI: 10.1007/s00894-016-3070-5

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  18 in total

1.  An experimental and theoretical study of the formation of nanostructures of self-assembled cyanuric acid through hydrogen bond networks on graphite.

Authors:  Kavita Kannappan; Tova L Werblowsky; Kwang T Rim; Bruce J Berne; George W Flynn
Journal:  J Phys Chem B       Date:  2007-04-25       Impact factor: 2.991

2.  Cyanuric acid and melamine on Au111: structure and energetics of hydrogen-bonded networks.

Authors:  Wei Xu; Mingdong Dong; Henkjan Gersen; Eva Rauls; Socorro Vázquez-Campos; Mercedes Crego-Calama; David N Reinhoudt; Ivan Stensgaard; Erik Laegsgaard; Trolle R Linderoth; Flemming Besenbacher
Journal:  Small       Date:  2007-05       Impact factor: 13.281

3.  Long-range corrected hybrid density functionals with damped atom-atom dispersion corrections.

Authors:  Jeng-Da Chai; Martin Head-Gordon
Journal:  Phys Chem Chem Phys       Date:  2008-09-29       Impact factor: 3.676

4.  Study of the structural and the spectral characteristics of [C3N3(NH2)3]n (n = 1-4) clusters.

Authors:  Zhenzhang Li; Guanglei Chen; Yuehua Xu; Xianju Wang; Zhoufei Wang
Journal:  J Phys Chem A       Date:  2013-11-18       Impact factor: 2.781

5.  Physical meaning of the QTAIM topological parameters in hydrogen bonding.

Authors:  Darío J R Duarte; Emilio L Angelina; Nélida M Peruchena
Journal:  J Mol Model       Date:  2014-11-05       Impact factor: 1.810

6.  Is the decrease of the total electron energy density a covalence indicator in hydrogen and halogen bonds?

Authors:  Emilio L Angelina; Darío J R Duarte; Nélida M Peruchena
Journal:  J Mol Model       Date:  2012-11-28       Impact factor: 1.810

7.  Selective self-organization of guest molecules in self-assembled molecular boxes.

Authors:  Jessica M C A Kerckhoffs; Mattijs G J ten Cate; Miguel A Mateos-Timoneda; Fijs W B van Leeuwen; Bianca Snellink-Ruël; Anthony L Spek; Huub Kooijman; Mercedes Crego-Calama; David N Reinhoudt
Journal:  J Am Chem Soc       Date:  2005-09-14       Impact factor: 15.419

8.  Thermodynamic stabilities of linear and crinkled tapes and cyclic rosettes in melamine--cyanurate assemblies: a model description.

Authors:  A G Bielejewska; C E Marjo; L J Prins; P Timmerman; F de Jong; D N Reinhoudt
Journal:  J Am Chem Soc       Date:  2001-08-08       Impact factor: 15.419

9.  Nature of halogen bonding. A study based on the topological analysis of the Laplacian of the electron charge density and an energy decomposition analysis.

Authors:  Darío J R Duarte; Gladis L Sosa; Nélida M Peruchena
Journal:  J Mol Model       Date:  2012-10-18       Impact factor: 1.810

10.  Phototriggered self-assembly of hydrogen-bonded rosette.

Authors:  Shiki Yagai; Toshiharu Nakajima; Takashi Karatsu; Ken-ichi Saitow; Akihide Kitamura
Journal:  J Am Chem Soc       Date:  2004-09-22       Impact factor: 15.419

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  1 in total

1.  Insights into the self-assembly steps of cyanuric acid toward rosette motifs: a DFT study.

Authors:  Andre N Petelski; Nélida M Peruchena; Silvana C Pamies; Gladis L Sosa
Journal:  J Mol Model       Date:  2017-08-14       Impact factor: 1.810

  1 in total

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