Literature DB >> 27487921

Envelope protein VP24 from White spot syndrome virus: expression, purification and crystallization.

Lifang Sun1, Yunkun Wu1.   

Abstract

White spot syndrome virus (WSSV) is a major shrimp pathogen known to infect penaeid shrimp and other crustaceans. VP24 is one of the major envelope proteins of WSSV. In order to facilitate purification, crystallization and structure determination, the predicted N-terminal transmembrane region of approximately 26 amino acids was truncated from VP24 and several mutants were prepared to increase the proportion of selenomethionine (SeMet) residues for subsequent structural determination using the SAD method. Truncated VP24, its mutants and the corresponding SeMet-labelled proteins were purified, and the native and SeMet proteins were crystallized by the hanging-drop vapour-diffusion method. Crystals of VP24 were obtained using a reservoir consisting of 0.1 M Tris-HCl pH 8.5, 2.75 M ammonium acetate with a drop volume ratio of two parts protein solution to one part reservoir solution. Notably, ATP was added as a critical additive to the drop with a final concentration of 10 mM. Crystals of SeMet-labelled VP24 mutant diffracted to 3.0 Å resolution and those of the native diffracted to 2.4 Å resolution; the crystals belonged to space group I213, with unit-cell parameters a = b = c = 140 Å.

Entities:  

Keywords:  VP24; WSSV; White spot syndrome virus; crystallization; envelope protein; purification

Mesh:

Substances:

Year:  2016        PMID: 27487921      PMCID: PMC4973298          DOI: 10.1107/S2053230X16009055

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  24 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  The white spot syndrome virus DNA genome sequence.

Authors:  M C van Hulten; J Witteveldt; S Peters; N Kloosterboer; R Tarchini; M Fiers; H Sandbrink; R K Lankhorst; J M Vlak
Journal:  Virology       Date:  2001-07-20       Impact factor: 3.616

3.  Identification of two major virion protein genes of white spot syndrome virus of shrimp.

Authors:  M C van Hulten; M Westenberg; S D Goodall; J M Vlak
Journal:  Virology       Date:  2000-01-20       Impact factor: 3.616

4.  Three functionally diverged major structural proteins of white spot syndrome virus evolved by gene duplication.

Authors:  Mariëlle C W van Hulten; Rob W Goldbach; Just M Vlak
Journal:  J Gen Virol       Date:  2000-10       Impact factor: 3.891

5.  Identification of genomic variations among geographic isolates of white spot syndrome virus using restriction analysis and Southern blot hybridization.

Authors:  Q Wang; L M Nunan; D V Lightner
Journal:  Dis Aquat Organ       Date:  2000-12-21       Impact factor: 1.802

6.  Complete genome sequence of the shrimp white spot bacilliform virus.

Authors:  F Yang; J He; X Lin; Q Li; D Pan; X Zhang; X Xu
Journal:  J Virol       Date:  2001-12       Impact factor: 5.103

7.  Identification of the nucleocapsid, tegument, and envelope proteins of the shrimp white spot syndrome virus virion.

Authors:  Jyh-Ming Tsai; Han-Ching Wang; Jiann-Horng Leu; Andrew H-J Wang; Ying Zhuang; Peter J Walker; Guang-Hsiung Kou; Chu-Fang Lo
Journal:  J Virol       Date:  2006-03       Impact factor: 5.103

8.  Identification of white spot syndrome virus (WSSV) envelope proteins involved in shrimp infection.

Authors:  Wenlin Wu; Lei Wang; Xiaobo Zhang
Journal:  Virology       Date:  2005-02-20       Impact factor: 3.616

9.  White spot syndrome virus VP24 interacts with VP28 and is involved in virus infection.

Authors:  Xixian Xie; Feng Yang
Journal:  J Gen Virol       Date:  2006-07       Impact factor: 3.891

10.  Transcriptional analysis of the DNA polymerase gene of shrimp white spot syndrome virus.

Authors:  Li-Li Chen; Han-Ching Wang; Chiu-Jung Huang; Shao-En Peng; Yen-Gu Chen; Shin-Jen Lin; Wei-Yu Chen; Chang-Feng Dai; Hon-Tsen Yu; Chung-Hsiung Wang; Chu-Fang Lo; Guang-Hsiung Kou
Journal:  Virology       Date:  2002-09-15       Impact factor: 3.616

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