| Literature DB >> 27483471 |
David C Warhurst1, John C Craig2, K Saki Raheem3.
Abstract
AntimalarialEntities:
Mesh:
Substances:
Year: 2016 PMID: 27483471 PMCID: PMC4970729 DOI: 10.1371/journal.pone.0160091
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Structures of the main pAP compounds examined.
Note outline (blue) of the p-aminopyridine moiety in CQ(2) and its presence in Atebrin, ATB(1) and (5). Also note 2 pAP moieties in each of (3), (4) and (6). Compound (5), a half–piperaquine, has low antiparasitic activity and shows 6 times less activity in the in vitro BIHA test than PQ (3) [14].
Fig 2Structures of the German CQ (resochin) replacement sontochin (SC) and PH-203, a highly active pAP recently developed from SC [20].
Physicochemical and other parameters for the compounds studied.
| antilog | LAR/VAR | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| logD4.8 | logD7.4 | Log CQ RI | logD7.4 | Antilog | D7.4-D4.8 | BHIA | BHIA | BHIA | |||||||||
| Drug | logP | pKa1 | pKa2 | pKa3 | pKa4 | pH | logD | (LAR/VAR) | LOGLAR | (res/sens) | LAR | logD4.8 | VAR | logVAR | IC50 mM | SE | n |
| CQ | 4.72 | 10.18 | 8.38 | -20 | -20 | 7.4 | 0.91668 | 1434882 | 5.156796 | 1.3 | 0.11 | 8 | |||||
| CQ | 4.72 | 10.18 | 8.38 | -20 | -20 | 4.8 | -4.24011 | -4.2401 | 0.91668 | 1.149 | 8.25434 | 5.75E-05 | |||||
| PQ | 6.11 | 6.88 | 6.24 | 5.72 | 5.39 | 7.4 | 5.98833 | 104378.2 | 5.01861 | 0.62 | 0.05 | 6 | |||||
| PQ | 6.11 | 6.88 | 6.24 | 5.72 | 5.39 | 4.8 | 0.96972 | 0.96972 | 5.98833 | 0.39 | 973492 | 9.3266 | |||||
| OHPQ | 5.67 | 6.6 | 6.41 | 5.39 | 4.83 | 7.4 | 5.60001 | 19874.33 | 4.298293 | 0.58 | 0.09 | 6 | |||||
| OHPQ | 5.67 | 6.6 | 6.41 | 5.39 | 4.83 | 4.8 | 1.30172 | 1.30172 | 5.60012 | 0.176 | 398118 | 20.032 | |||||
| DCQ | 6.1 | 8.71 | 8.34 | 7.36 | 5.9 | 7.4 | 4.19 | 48897788 | 6.69 | 0.61 | 0.09 | 7 | |||||
| DCQ | 6.1 | 8.71 | 8.34 | 7.36 | 5.9 | 4.8 | -2.5 | -2.5 | 4.19 | 0.176 | 15488.2 | 0.0032 | |||||
| DCQa | 6.1 | 8.71 | 8.34 | 7.36 | 5.9 | 7.4 | 3.53586 | 3.79E+08 | 8.579145 | 0.61 | 0.09 | 7 | |||||
| DCQa | 6.1 | 8.71 | 8.34 | 7.36 | 5.9 | 4.8 | -5.04328 | -5.0433 | 3.53586 | 0.176 | 3434.48 | 9.05E-06 | |||||
| 5 | 3.48 | 7.92 | 5.54 | -20 | -20 | 7.4 | 2.84081 | 1965.476 | 3.293468 | 3.35 | 0.33 | 9 | |||||
| 5 | 3.48 | 7.92 | 5.54 | -20 | -20 | 4.8 | -0.45266 | -0.4527 | 2.84081 | 1.308 | 693.123 | 0.3526 | |||||
| HCQ | 3.835 | 9.66 | 8.27 | -20 | -20 | 7.4 | 0.64976 | 139607.1 | 5.144907 | ||||||||
| HCQ | 3.835 | 9.66 | 8.27 | -20 | -20 | 4.8 | -4.49515 | -4.4952 | 0.64976 | 1.898 | 4.46437 | 3.20E-05 | |||||
| DECQ | 4.35 | 10.96 | 8.4 | -20 | -20 | 7.4 | -0.2514 | 144113.8 | 5.158706 | ||||||||
| DECQ | 4.35 | 10.96 | 8.4 | -20 | -20 | 4.8 | -5.41011 | -5.4101 | -0.2514 | 1.564 | 0.56053 | 3.89E-06 | |||||
| DAQ | 3.31 | 8.72 | 7.53 | -20 | -20 | 7.4 | 1.61036 | 89365.84 | 4.951172 | ||||||||
| DAQ | 3.31 | 8.72 | 7.53 | -20 | -20 | 4.8 | -3.34081 | -3.3408 | 1.61034 | 0.732 | 40.7721 | 0.0005 | |||||
| AQ | 4.26 | 8.66 | 7.05 | -20 | -20 | 7.4 | 2.82344 | 47410.07 | 4.675871 | ||||||||
| AQ | 4.26 | 8.66 | 7.05 | -20 | -20 | 4.8 | -1.85244 | -1.8524 | 2.82344 | 0.297 | 665.94 | 0.014 | |||||
| ATB | 4.85 | 10.47 | 7.12 | -20 | -20 | 7.4 | 1.59654 | 54779.28 | 4.738616 | ||||||||
| ATB | 4.85 | 10.47 | 7.12 | -20 | -20 | 4.8 | -3.14207 | -3.1421 | 1.59654 | 0.682 | 39,4951 | 0.0007 | |||||
| SC | 5.15 | 10.15 | 7.28 | -20 | -20 | 7.4 | 2.1544 | 68522.82 | 4.835835 | ||||||||
| SC | 5.15 | 10.15 | 7.28 | -20 | -20 | 4.8 | -2.68144 | -2.6814 | 2.1544 | 0.376 | 142.92 | 0.0021 | |||||
| PH203 | 6.45 | 10.29 | 5.57 | -20 | -20 | 7.4 | 3.55307 | 2698.94 | 3.41193 | ||||||||
| PH203 | 6.45 | 10.29 | 5.57 | -20 | -20 | 4.8 | 0.12188 | 0.12188 | 3.55307 | 0.193 | 3573.32 | 1.324 |
Fig 32nd order polynomial for logRI (y) on Log LAR(x) for 11 p-aminopyridines and one outlier.
AM1 energies.
Note reduced distance between N-1 and 4-amino N atoms in all the diprotonated forms and increased separation of quinolines N1 in tetraprotonated forms of DCQ.
| AMI (rms 0.001) | R&S | R&S | R&S | PQ | PQ2H+ | PQ4+ | R-DCQ,S- | R-DCQ,S- | R-DCQ,S- | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CQ | CQ1H+ | CQ2H+ | (N-1) | DCQ | DCQ (2H+) | DCQ (4H+) | RS-DCQ | RS-DCQ N1-2H+ | RS-DCQ 4H+ | |||
| Total energy kcal/mol | -84345 | -84513 | -84650 | -141613 | -141941 | -142025 | -138676 | -139012 | -139065 | -138675 | -139010 | -139071 |
| HOF kcal/mol | 23.65 | 170.2 | 347.9 | 126.7 | 428.8 | 974 | 106.2 | 400.7 | 977.4 | 107.9 | 402.1 | 971.3 |
| distance between quinolines N-1 | NA | NA | NA | 17.65Å | 18.29Å | 18.3Å | 15.01Å | 16.43Å | 11.93Å | 15.99Å | ||
| bridging sc N-N | NA | NA | NA | 4.985Å | 4.965Å | 5.073Å | 2.986Å | 2.985Å | 3.036Å | 2.952Å | 2.983Å | 3.019Å |
| quinoline N-1 | 7.893Å | 7.999Å | 8.991Å | 6.526Å | 6.827Å | 6.83Å | 6.038Å | 6.992Å | 7.0Å | 7.585Å | 6.806Å | 7.662Å |
| to terminal sc-N | 6.52Å | 6.819Å | 6.837Å | 6.582Å | 6.836Å | 7.032Å | 6.774Å | 7.534Å | 7.571Å | |||
| separation of N-1 | 4.255 Å | 4.258 Å | 4.280 | 4.231 | 4.282 | 4.234 | 4.260 | 4.221 | ||||
| and 4-amino N | 4.280 | 4.231 | 4.252 | 4.222 | 4.249 | 4.210 |