Literature DB >> 27481396

Evidence for Non-neutral Evolution in a Sodium Channel Gene in African Weakly Electric Fish (Campylomormyrus, Mormyridae).

Christiane Paul1, Frank Kirschbaum2, Victor Mamonekene3, Ralph Tiedemann4.   

Abstract

Voltage-gated sodium channels, Nav1, play a crucial role in the generation and propagation of action potentials and substantially contribute to the shape of their rising phase. The electric organ discharge (EOD) of African weakly electric fish (Mormyroidea) is the sum of action potentials fired from all electrocytes of the electric organ at the same time and hence voltage-gated sodium channels are one factor-together with the electrocyte's morphology and innervation pattern-that determines the properties of these EODs. Due to the fish-specific genome duplication, teleost fish possess eight copies of sodium channel genes (SCN), which encode for Nav1 channels. In mormyroids, SCN4aa is solely expressed in the electrocytes of the adult electric organ. In this study, we compared entire SCN4aa sequences of six species of the genus Campylomormyrus and identified nonsynonymous substitutions among them. SCN4aa in Campylomormyrus exhibits a much higher evolutionary rate compared to its paralog SCN4ab, whose expression is not restricted to the electric organ. We also found evidence for strong positive selection on the SCN4aa gene within Mormyridae and along the lineage ancestral to the Mormyridae. We have identified sites at which all nonelectric teleosts are monomorphic in their amino acid, but mormyrids have different amino acids. Our findings confirm the crucial role of SCN4aa in EOD evolution among mormyrid weakly electric fish. The inferred positive selection within Mormyridae makes this gene a prime candidate for further investigation of the divergent evolution of pulse-type EODs among closely related species.

Entities:  

Keywords:  Campylomormyrus; Mormyridae; Mormyroidea; Positive selection; SCN4aa; Voltage-gated sodium channel

Mesh:

Substances:

Year:  2016        PMID: 27481396     DOI: 10.1007/s00239-016-9754-8

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  62 in total

Review 1.  Gene and genome duplications in vertebrates: the one-to-four (-to-eight in fish) rule and the evolution of novel gene functions.

Authors:  A Meyer; M Schartl
Journal:  Curr Opin Cell Biol       Date:  1999-12       Impact factor: 8.382

2.  Role of the C-terminal domain in inactivation of brain and cardiac sodium channels.

Authors:  M Mantegazza; F H Yu; W A Catterall; T Scheuer
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-11       Impact factor: 11.205

Review 3.  Sodium channel inactivation: molecular determinants and modulation.

Authors:  Werner Ulbricht
Journal:  Physiol Rev       Date:  2005-10       Impact factor: 37.312

4.  Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level.

Authors:  Jianzhi Zhang; Rasmus Nielsen; Ziheng Yang
Journal:  Mol Biol Evol       Date:  2005-08-17       Impact factor: 16.240

5.  Sodium channel genes and the evolution of diversity in communication signals of electric fishes: convergent molecular evolution.

Authors:  Harold H Zakon; Ying Lu; Derrick J Zwickl; David M Hillis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

6.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2006-08-23       Impact factor: 6.937

7.  Ankyrin-G regulates inactivation gating of the neuronal sodium channel, Nav1.6.

Authors:  Emi Shirahata; Hirohide Iwasaki; Masahiro Takagi; Changqing Lin; Vann Bennett; Yasushi Okamura; Kiyoshi Hayasaka
Journal:  J Neurophysiol       Date:  2006-06-14       Impact factor: 2.714

Review 8.  From 2R to 3R: evidence for a fish-specific genome duplication (FSGD).

Authors:  Axel Meyer; Yves Van de Peer
Journal:  Bioessays       Date:  2005-09       Impact factor: 4.345

9.  Molecular systematics of the African electric fishes (Mormyroidea: teleostei) and a model for the evolution of their electric organs.

Authors:  J P Sullivan; S Lavoué; C D Hopkins
Journal:  J Exp Biol       Date:  2000-02       Impact factor: 3.312

10.  SNAP: predict effect of non-synonymous polymorphisms on function.

Authors:  Yana Bromberg; Burkhard Rost
Journal:  Nucleic Acids Res       Date:  2007-05-25       Impact factor: 16.971

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  7 in total

1.  Electric organ discharge diversification in mormyrid weakly electric fish is associated with differential expression of voltage-gated ion channel genes.

Authors:  Rebecca Nagel; Frank Kirschbaum; Ralph Tiedemann
Journal:  J Comp Physiol A Neuroethol Sens Neural Behav Physiol       Date:  2017-02-23       Impact factor: 1.836

2.  Divergent cis-regulatory evolution underlies the convergent loss of sodium channel expression in electric fish.

Authors:  Sarah LaPotin; Mary E Swartz; David M Luecke; Savvas J Constantinou; Jason R Gallant; Johann K Eberhart; Harold H Zakon
Journal:  Sci Adv       Date:  2022-06-01       Impact factor: 14.957

3.  Electrostatic Tuning of a Potassium Channel in Electric Fish.

Authors:  Immani Swapna; Alfredo Ghezzi; Julia M York; Michael R Markham; D Brent Halling; Ying Lu; Jason R Gallant; Harold H Zakon
Journal:  Curr Biol       Date:  2018-06-21       Impact factor: 10.834

4.  Voltage-Gated Na+ Channel Isoforms and Their mRNA Expression Levels and Protein Abundance in Three Electric Organs and the Skeletal Muscle of the Electric Eel Electrophorus electricus.

Authors:  Biyun Ching; Jia M Woo; Kum C Hiong; Mel V Boo; Wai P Wong; Shit F Chew; Yuen K Ip
Journal:  PLoS One       Date:  2016-12-01       Impact factor: 3.240

5.  The transcriptional correlates of divergent electric organ discharges in Paramormyrops electric fish.

Authors:  Mauricio Losilla; David Michael Luecke; Jason R Gallant
Journal:  BMC Evol Biol       Date:  2020-01-09       Impact factor: 3.260

Review 6.  Vocal and Electric Fish: Revisiting a Comparison of Two Teleost Models in the Neuroethology of Social Behavior.

Authors:  Kent D Dunlap; Haley M Koukos; Boris P Chagnaud; Harold H Zakon; Andrew H Bass
Journal:  Front Neural Circuits       Date:  2021-08-19       Impact factor: 3.492

7.  Transcriptome-wide single nucleotide polymorphisms related to electric organ discharge differentiation among African weakly electric fish species.

Authors:  Julia Canitz; Frank Kirschbaum; Ralph Tiedemann
Journal:  PLoS One       Date:  2020-10-27       Impact factor: 3.240

  7 in total

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