Literature DB >> 27466409

Phosphorylation of an HP1-like protein is a prerequisite for heterochromatin body formation in Tetrahymena DNA elimination.

Kensuke Kataoka1, Tomoko Noto2, Kazufumi Mochizuki1.   

Abstract

Multiple heterochromatic loci are often clustered into a higher order nuclear architecture called a heterochromatin body in diverse eukaryotes. Although phosphorylation of Heterochromatin Protein 1 (HP1) family proteins regulates heterochromatin dynamics, its role in heterochromatin bodies remains unknown. We previously reported that dephosphorylation of the HP1-like protein Pdd1p is required for the formation of heterochromatin bodies during the process of programmed DNA elimination in the ciliated protozoan Tetrahymena Here, we show that the heterochromatin body component Jub4p is required for Pdd1p phosphorylation, heterochromatin body formation, and DNA elimination. Moreover, our analyses of unphosphorylatable Pdd1p mutants demonstrate that Pdd1p phosphorylation is required for heterochromatin body formation and DNA elimination, whereas it is dispensable for local heterochromatin assembly. Therefore, both phosphorylation and the following dephosphorylation of Pdd1p are necessary to facilitate the formation of heterochromatin bodies. We suggest that Jub4p-mediated phosphorylation of Pdd1p creates a chromatin environment that is a prerequisite for subsequent heterochromatin body assembly and DNA elimination.

Entities:  

Keywords:  DNA elimination; HP1 phosphorylation; Tetrahymena; heterochromatin body

Mesh:

Substances:

Year:  2016        PMID: 27466409      PMCID: PMC4987781          DOI: 10.1073/pnas.1606012113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

1.  Phosphoproteomic analysis of protein phosphorylation networks in Tetrahymena thermophila, a model single-celled organism.

Authors:  Miao Tian; Xiulan Chen; Qian Xiong; Jie Xiong; Chuanle Xiao; Feng Ge; Fuquan Yang; Wei Miao
Journal:  Mol Cell Proteomics       Date:  2013-11-07       Impact factor: 5.911

2.  Heterochromatin protein 1 is extensively decorated with histone code-like post-translational modifications.

Authors:  Gary LeRoy; John T Weston; Barry M Zee; Nicolas L Young; Mariana D Plazas-Mayorca; Benjamin A Garcia
Journal:  Mol Cell Proteomics       Date:  2009-06-30       Impact factor: 5.911

3.  The Tetrahymena argonaute-binding protein Giw1p directs a mature argonaute-siRNA complex to the nucleus.

Authors:  Tomoko Noto; Henriette M Kurth; Kensuke Kataoka; Lucia Aronica; Leroi V DeSouza; K W Michael Siu; Ronald E Pearlman; Martin A Gorovsky; Kazufumi Mochizuki
Journal:  Cell       Date:  2010-03-05       Impact factor: 41.582

4.  Excision of micronuclear-specific DNA requires parental expression of pdd2p and occurs independently from DNA replication in Tetrahymena thermophila.

Authors:  M A Nikiforov; J F Smothers; M A Gorovsky; C D Allis
Journal:  Genes Dev       Date:  1999-11-01       Impact factor: 11.361

5.  A domesticated piggyBac transposase plays key roles in heterochromatin dynamics and DNA cleavage during programmed DNA deletion in Tetrahymena thermophila.

Authors:  Chao-Yin Cheng; Alexander Vogt; Kazufumi Mochizuki; Meng-Chao Yao
Journal:  Mol Biol Cell       Date:  2010-03-31       Impact factor: 4.138

6.  LIA4 encodes a chromoshadow domain protein required for genomewide DNA rearrangements in Tetrahymena thermophila.

Authors:  Scott A Horrell; Douglas L Chalker
Journal:  Eukaryot Cell       Date:  2014-08-01

7.  A non-long terminal repeat retrotransposon family is restricted to the germ line micronucleus of the ciliated protozoan Tetrahymena thermophila.

Authors:  Jeffrey S Fillingham; Trine A Thing; Nama Vythilingum; Alex Keuroghlian; Deanna Bruno; G Brian Golding; Ronald E Pearlman
Journal:  Eukaryot Cell       Date:  2004-02

8.  Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation.

Authors:  Tamir Chandra; Kristina Kirschner; Jean-Yves Thuret; Benjamin D Pope; Tyrone Ryba; Scott Newman; Kashif Ahmed; Shamith A Samarajiwa; Rafik Salama; Thomas Carroll; Rory Stark; Rekin's Janky; Masako Narita; Lixiang Xue; Agustin Chicas; Sabrina Nũnez; Ralf Janknecht; Yoko Hayashi-Takanaka; Michael D Wilson; Aileen Marshall; Duncan T Odom; M Madan Babu; David P Bazett-Jones; Simon Tavaré; Paul A W Edwards; Scott W Lowe; Hiroshi Kimura; David M Gilbert; Masashi Narita
Journal:  Mol Cell       Date:  2012-07-12       Impact factor: 17.970

9.  The Drosophila salivary gland chromocenter contains highly polytenized subdomains of mitotic heterochromatin.

Authors:  P Zhang; A C Spradling
Journal:  Genetics       Date:  1995-02       Impact factor: 4.562

10.  LIA5 is required for nuclear reorganization and programmed DNA rearrangements occurring during tetrahymena macronuclear differentiation.

Authors:  Annie Wan Yi Shieh; Douglas L Chalker
Journal:  PLoS One       Date:  2013-09-17       Impact factor: 3.240

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  6 in total

1.  Phosphoglycerate kinase: structural aspects and functions, with special emphasis on the enzyme from Kinetoplastea.

Authors:  Maura Rojas-Pirela; Diego Andrade-Alviárez; Verónica Rojas; Ulrike Kemmerling; Ana J Cáceres; Paul A Michels; Juan Luis Concepción; Wilfredo Quiñones
Journal:  Open Biol       Date:  2020-11-25       Impact factor: 6.411

2.  A Polycomb repressive complex is required for RNAi-mediated heterochromatin formation and dynamic distribution of nuclear bodies.

Authors:  Jing Xu; Xiaolu Zhao; Fengbiao Mao; Venkatesha Basrur; Beatrix Ueberheide; Brian T Chait; C David Allis; Sean D Taverna; Shan Gao; Wei Wang; Yifan Liu
Journal:  Nucleic Acids Res       Date:  2021-06-04       Impact factor: 16.971

3.  The piggyBac transposon-derived genes TPB1 and TPB6 mediate essential transposon-like excision during the developmental rearrangement of key genes in Tetrahymena thermophila.

Authors:  Chao-Yin Cheng; Janet M Young; Chih-Yi Gabriela Lin; Ju-Lan Chao; Harmit S Malik; Meng-Chao Yao
Journal:  Genes Dev       Date:  2016-12-15       Impact factor: 11.361

4.  Transgenerational function of Tetrahymena Piwi protein Twi8p at distinctive noncoding RNA loci.

Authors:  Brian M Farley; Kathleen Collins
Journal:  RNA       Date:  2017-01-04       Impact factor: 4.942

Review 5.  Roles of Noncoding RNAs in Ciliate Genome Architecture.

Authors:  Sarah E Allen; Mariusz Nowacki
Journal:  J Mol Biol       Date:  2020-01-10       Impact factor: 5.469

Review 6.  Whats, hows and whys of programmed DNA elimination in Tetrahymena.

Authors:  Tomoko Noto; Kazufumi Mochizuki
Journal:  Open Biol       Date:  2017-10       Impact factor: 6.411

  6 in total

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