Literature DB >> 27463845

Drug-Target Networks.

Ingo Vogt1, Jordi Mestres2.   

Abstract

Far from the traditional view of selective drug-target interactions, the recent accumulation of large amounts of interaction data for small-molecule drugs and protein targets requires innovative visualisation and analysis tools that are able to deal with what has become a truly complex system. In this context, network theory offers both a robust and illustrative framework to investigate drug-target connections and has been swiftly and widely embraced by the chemical biology and molecular informatics communities. A survey of the most recent applications of drug-target networks to detect cross-pharmacology relationships among targets and to identify new targets for known drugs is provided. Finally, some of the current limitations are also discussed, including the actual completeness of interaction data and the information loss intrinsically associated with the one-mode projection of drug-target networks.
Copyright © 2010 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  Affinity fingerprint; Chemogenomics; Drug design; Drug repurposing; Molecular evolution; Polypharmacology; Target profiling

Year:  2010        PMID: 27463845     DOI: 10.1002/minf.200900069

Source DB:  PubMed          Journal:  Mol Inform        ISSN: 1868-1743            Impact factor:   3.353


  13 in total

1.  BETA: a comprehensive benchmark for computational drug-target prediction.

Authors:  Nansu Zong; Ning Li; Andrew Wen; Victoria Ngo; Yue Yu; Ming Huang; Shaika Chowdhury; Chao Jiang; Sunyang Fu; Richard Weinshilboum; Guoqian Jiang; Lawrence Hunter; Hongfang Liu
Journal:  Brief Bioinform       Date:  2022-07-18       Impact factor: 13.994

2.  Considerations of Protein Subpockets in Fragment-Based Drug Design.

Authors:  Matthew Bartolowits; V Jo Davisson
Journal:  Chem Biol Drug Des       Date:  2015-08-31       Impact factor: 2.817

3.  Deep mining heterogeneous networks of biomedical linked data to predict novel drug-target associations.

Authors:  Nansu Zong; Hyeoneui Kim; Victoria Ngo; Olivier Harismendy
Journal:  Bioinformatics       Date:  2017-08-01       Impact factor: 6.937

4.  Network-based inference methods for drug repositioning.

Authors:  Hailin Chen; Heng Zhang; Zuping Zhang; Yiqin Cao; Wenliang Tang
Journal:  Comput Math Methods Med       Date:  2015-04-12       Impact factor: 2.238

5.  A simple mathematical approach to the analysis of polypharmacology and polyspecificity data.

Authors:  Gerry Maggiora; Vijay Gokhale
Journal:  F1000Res       Date:  2017-06-06

6.  Use of natural products as chemical library for drug discovery and network pharmacology.

Authors:  Jiangyong Gu; Yuanshen Gui; Lirong Chen; Gu Yuan; Hui-Zhe Lu; Xiaojie Xu
Journal:  PLoS One       Date:  2013-04-25       Impact factor: 3.240

7.  Taking Open Innovation to the Molecular Level - Strengths and Limitations.

Authors:  Barbara Zdrazil; Niklas Blomberg; Gerhard F Ecker
Journal:  Mol Inform       Date:  2012-08-07       Impact factor: 3.353

8.  CVDHD: a cardiovascular disease herbal database for drug discovery and network pharmacology.

Authors:  Jiangyong Gu; Yuanshen Gui; Lirong Chen; Gu Yuan; Xiaojie Xu
Journal:  J Cheminform       Date:  2013-12-18       Impact factor: 5.514

9.  A Drug-Target Network-Based Approach to Evaluate the Efficacy of Medicinal Plants for Type II Diabetes Mellitus.

Authors:  Jiangyong Gu; Lirong Chen; Gu Yuan; Xiaojie Xu
Journal:  Evid Based Complement Alternat Med       Date:  2013-10-10       Impact factor: 2.629

Review 10.  Drug Repurposing Is a New Opportunity for Developing Drugs against Neuropsychiatric Disorders.

Authors:  Hyeong-Min Lee; Yuna Kim
Journal:  Schizophr Res Treatment       Date:  2016-03-17
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.