Literature DB >> 27463194

How to Deal with Batch Effect in Sequential Microarray Experiments?

Nino Demetrashvili1,2, Ken Kron2,3, Vaijayanti Pethe2,4, Bharati Bapat2,3,4, Laurent Briollais5,6.   

Abstract

Keywords:  Batch effect adjustment; Clustering; Empirical Bayes; Methylation profile; Sequential microarray experiments

Year:  2010        PMID： 27463194     DOI： 10.1002/minf.200900019

Source DB:  PubMed          Journal:  Mol Inform        ISSN： 1868-1743            Impact factor:   3.353


× No keyword cloud information.
  3 in total

1.  Data aggregation at the level of molecular pathways improves stability of experimental transcriptomic and proteomic data.

Authors:  Nicolas Borisov; Maria Suntsova; Maxim Sorokin; Andrew Garazha; Olga Kovalchuk; Alexander Aliper; Elena Ilnitskaya; Ksenia Lezhnina; Mikhail Korzinkin; Victor Tkachev; Vyacheslav Saenko; Yury Saenko; Dmitry G Sokov; Nurshat M Gaifullin; Kirill Kashintsev; Valery Shirokorad; Irina Shabalina; Alex Zhavoronkov; Bhubaneswar Mishra; Charles R Cantor; Anton Buzdin
Journal:  Cell Cycle       Date:  2017-08-21       Impact factor: 4.534

2.  Molecular pathway activation features of pediatric acute myeloid leukemia (AML) and acute lymphoblast leukemia (ALL) cells.

Authors:  Ivan Petrov; Maria Suntsova; Olga Mutorova; Maxim Sorokin; Andrew Garazha; Elena Ilnitskaya; Pavel Spirin; Sergey Larin; Olga Kovalchuk; Vladimir Prassolov; Alex Zhavoronkov; Alexander Roumiantsev; Anton Buzdin
Journal:  Aging (Albany NY)       Date:  2016-11-19       Impact factor: 5.682

3.  Shambhala: a platform-agnostic data harmonizer for gene expression data.

Authors:  Nicolas Borisov; Irina Shabalina; Victor Tkachev; Maxim Sorokin; Andrew Garazha; Andrey Pulin; Ilya I Eremin; Anton Buzdin
Journal:  BMC Bioinformatics       Date:  2019-02-06       Impact factor: 3.169
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.