Literature DB >> 27460372

SNP Arrays for Species Identification in Salmonids.

Roman Wenne1, Agata Drywa2, Matthew Kent3, Kristil Kindem Sundsaasen3, Sigbjørn Lien3.   

Abstract

The use of SNP genotyping microarrays, developed in one species to analyze a closely related species for which genomic sequence information is scarce, enables the rapid development of a genomic resource (SNP information) without the need to develop new species-specific markers. Using large numbers of microarray SNPs offers the best chance to detect informative markers in nontarget species, markers that can very often be assayed using a lower throughput platform as is described in this paper.

Keywords:  Brown trout; Genotyping; Rainbow trout; SNP array; Salmon

Mesh:

Year:  2016        PMID: 27460372     DOI: 10.1007/978-1-4939-3774-5_6

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  3 in total

1.  An extremely sensitive nested PCR-RFLP mitochondrial marker for detection and identification of salmonids in eDNA from water samples.

Authors:  Laura Clusa; Alba Ardura; Sara Fernández; Agustín A Roca; Eva García-Vázquez
Journal:  PeerJ       Date:  2017-02-28       Impact factor: 2.984

2.  Comparison between single and multi-locus approaches for specimen identification in Mytilus mussels.

Authors:  María Angélica Larraín; Pía González; Claudio Pérez; Cristián Araneda
Journal:  Sci Rep       Date:  2019-12-23       Impact factor: 4.379

3.  Identification of Ancestry Informative Markers in Mediterranean Trout Populations of Molise (Italy): A Multi-Methodological Approach with Machine Learning.

Authors:  Giovanna Salvatore; Valentino Palombo; Stefano Esposito; Nicolaia Iaffaldano; Mariasilvia D'Andrea
Journal:  Genes (Basel)       Date:  2022-07-28       Impact factor: 4.141

  3 in total

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