Literature DB >> 27452076

Effector Roles of Putidaredoxin on Cytochrome P450cam Conformational States.

Shu-Hao Liou1, Mavish Mahomed1, Young-Tae Lee1, David B Goodin1.   

Abstract

In this study, the effector role of Pdx (putidaredoxin) on cytochrome P450cam conformation is refined by attaching two different spin labels, MTSL or BSL (bifunctional spin-label) onto the F or G helices and using DEER (double electron-electron resonance) to measure the distance between labels. Recent EPR and crystallographic studies have observed that oxidized Pdx induces substrate-bound P450cam to change from the closed to the open state. However, this change was not observed by DEER in the reduced Pdx complex with carbon-monoxide-bound P450cam (Fe(2+)CO). In addition, recent NMR studies have failed to observe a change in P450cam conformation upon binding Pdx. Hence, resolving these issues is important for a full understanding the effector role of Pdx. Here we show that oxidized Pdx induces camphor-bound P450cam to shift from the closed to the open conformation when labeled on either the F or G helices with MTSL. BSL at these sites can either narrow the distance distribution widths dramatically or alter the extent of the conformational change. In addition, we report DEER spectra on a mixed oxidation state containing oxidized Pdx and ferrous CO-bound P450cam, showing that P450cam remains closed. This indicates that CO binding to the heme prevents P450cam from opening, overriding the influence exerted by Pdx binding. Finally, we report the open form P450cam crystal structure with substrate bound, which suggests that crystal packing effects may prevent conformational conversion. Using multiple labeling approaches, DEER provides a unique perspective to resolve how the conformation of P450cam depends on Pdx and ligand states.

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Year:  2016        PMID: 27452076     DOI: 10.1021/jacs.6b04110

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  20 in total

1.  Unexpected Differences between Two Closely Related Bacterial P450 Camphor Monooxygenases.

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2.  Identification of productive and futile encounters in an electron transfer protein complex.

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3.  Effect of Redox Partner Binding on Cytochrome P450 Conformational Dynamics.

Authors:  Dipanwita Batabyal; Logan S Richards; Thomas L Poulos
Journal:  J Am Chem Soc       Date:  2017-09-07       Impact factor: 15.419

4.  Site-Specific 1D and 2D IR Spectroscopy to Characterize the Conformations and Dynamics of Protein Molecular Recognition.

Authors:  Sashary Ramos; Megan C Thielges
Journal:  J Phys Chem B       Date:  2019-03-21       Impact factor: 2.991

5.  Conformational Response of N-Terminally Truncated Cytochrome P450 3A4 to Ligand Binding in Solution.

Authors:  Shih-Wei Chuo; Shu-Hao Liou; Lee-Ping Wang; R David Britt; Thomas L Poulos; Irina F Sevrioukova; David B Goodin
Journal:  Biochemistry       Date:  2019-09-06       Impact factor: 3.162

6.  Conformational selection dominates binding of steroids to human cytochrome P450 17A1.

Authors:  F Peter Guengerich; Clayton J Wilkey; Sarah M Glass; Michael J Reddish
Journal:  J Biol Chem       Date:  2019-05-09       Impact factor: 5.157

7.  Conformational Heterogeneity and the Affinity of Substrate Molecular Recognition by Cytochrome P450cam.

Authors:  Edward J Basom; Bryce A Manifold; Megan C Thielges
Journal:  Biochemistry       Date:  2017-06-14       Impact factor: 3.162

8.  Effect of redox partner binding on CYP101D1 conformational dynamics.

Authors:  Dipanwita Batabyal; Thomas L Poulos
Journal:  J Inorg Biochem       Date:  2018-03-01       Impact factor: 4.155

Review 9.  Ru(II)-diimine complexes and cytochrome P450 working hand-in-hand.

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Journal:  J Inorg Biochem       Date:  2020-09-12       Impact factor: 4.155

10.  Structure and Function of the Cytochrome P450 Monooxygenase Cinnamate 4-hydroxylase from Sorghum bicolor.

Authors:  Bixia Zhang; Kevin M Lewis; Alejandra Abril; Dmitri R Davydov; Wilfred Vermerris; Scott E Sattler; ChulHee Kang
Journal:  Plant Physiol       Date:  2020-04-24       Impact factor: 8.340

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