Literature DB >> 27444707

Taxonomic status and phylogenetic relationship of tits based on mitogenomes and nuclear segments.

Xuejuan Li1, Liliang Lin1, Aiming Cui1, Jie Bai1, Xiaoyang Wang2, Chao Xin1, Zhen Zhang1, Chao Yang3, Ruirui Gao1, Yuan Huang4, Fumin Lei5.   

Abstract

The phylogeny of tits has been studied using various molecular markers, but their phylogenetic relationships remain controversial. To further investigate their taxonomic status and phylogenetic relationships, the entire mitochondrial genomes (mitogenomes) and five nuclear segments were sequenced from 10 species of tits and two outgroups (Sylviparus modestus and Remiz consobrinus), followed by the comparison of mitogenomic characteristics and reconstruction of phylogenetic relationship based on the different datasets. The results revealed the following: the mitogenomes of 10 ingroup tits, each 16,758-16,799bp in length, displayed typical mitogenome organization and the gene order found in most previously determined Passeriformes mitogenomes; close relationships existed between Parus major and P. monticolus, between P. montanus and P. palustris, and between P. ater and P. venustulus; and Pseudopodoces humilis was a sister group to P. spilonotus, P. cyanus, or the clade containing P. major and P. monticolus.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Comparative genomics; Mitogenome; Nuclear segment; Phylogeny; Tits

Mesh:

Substances:

Year:  2016        PMID: 27444707     DOI: 10.1016/j.ympev.2016.07.022

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  2 in total

1.  Divergent and parallel routes of biochemical adaptation in high-altitude passerine birds from the Qinghai-Tibet Plateau.

Authors:  Xiaojia Zhu; Yuyan Guan; Anthony V Signore; Chandrasekhar Natarajan; Shane G DuBay; Yalin Cheng; Naijian Han; Gang Song; Yanhua Qu; Hideaki Moriyama; Federico G Hoffmann; Angela Fago; Fumin Lei; Jay F Storz
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-05       Impact factor: 11.205

2.  Data on taxonomic status and phylogenetic relationship of tits.

Authors:  Xue-Juan Li; Li-Liang Lin; Ai-Ming Cui; Jie Bai; Xiao-Yang Wang; Chao Xin; Zhen Zhang; Chao Yang; Rui-Rui Gao; Yuan Huang; Fu-Min Lei
Journal:  Data Brief       Date:  2016-11-28
  2 in total

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