Literature DB >> 27440555

Hydrophobic Association in Mixed Urea-TMAO Solutions.

Pritam Ganguly1,2, Nico F A van der Vegt3, Joan-Emma Shea1,2.   

Abstract

The formation of a hydrophobic core is key to the folding and resulting function of most proteins in the cell. In several organisms, as well as in many in vitro experiments, protein folding is modulated by the presence of osmolytes, but the mechanism by which hydrophobic association occurs is not well understood. We present a study of the solvation thermodynamics of hydrophobic self-association in mixed-osmolyte urea-TMAO solutions, with neopentane as a model hydrophobic molecule. Using molecular dynamics simulations and the Kirkwood-Buff theory of solutions, we show that a sensitive balance between the TMAO-water and the TMAO-urea interactions governs the osmolyte-induced changes in hydrophobic association in mixed urea-TMAO solutions. This balance must be correctly incorporated in force-field parametrization because hydrophobic association can be either enhanced or prevented all together by slightly increasing or decreasing the osmolyte-water affinity and osmolyte-osmolyte self-affinity of TMAO molecules.

Entities:  

Year:  2016        PMID: 27440555     DOI: 10.1021/acs.jpclett.6b01344

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  2 in total

1.  Dynamical Model for the Counteracting Effects of Trimethylamine N-Oxide on Urea in Aqueous Solutions under Pressure.

Authors:  Xiaojing Teng; Toshiko Ichiye
Journal:  J Phys Chem B       Date:  2020-02-27       Impact factor: 2.991

2.  Weighted persistent homology for osmolyte molecular aggregation and hydrogen-bonding network analysis.

Authors:  D Vijay Anand; Zhenyu Meng; Kelin Xia; Yuguang Mu
Journal:  Sci Rep       Date:  2020-06-16       Impact factor: 4.379

  2 in total

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