| Literature DB >> 27436109 |
Kim S Grützmacher1, Sophie Köndgen1, Verena Keil1, Angelique Todd2, Anna Feistner2, Ilka Herbinger3, Klara Petrzelkova4,5, Terrence Fuh2, Siv Aina Leendertz1, Sébastien Calvignac-Spencer1, Fabian H Leendertz6.
Abstract
Pneumoviruses have been identified as causative agents in several respiratory disease outbreaks in habituated wild great apes. Based on phylogenetic evidence, transmission from humans is likely. However, the pathogens have never been detected in the local human population prior to or at the same time as an outbreak. Here, we report the first simultaneous detection of a human respiratory syncytial virus (HRSV) infection in western lowland gorillas (Gorilla gorilla gorilla) and in the local human population at a field program in the Central African Republic. A total of 15 gorilla and 15 human fecal samples and 80 human throat swabs were tested for HRSV, human metapneumovirus, and other respiratory viruses. We were able to obtain identical sequences for HRSV A from four gorillas and four humans. In contrast, we did not detect HRSV or any other classic human respiratory virus in gorilla fecal samples in two other outbreaks in the same field program. Enterovirus sequences were detected but the implication of these viruses in the etiology of these outbreaks remains speculative. Our findings of HRSV in wild but human-habituated gorillas underline, once again, the risk of interspecies transmission from humans to endangered great apes.Entities:
Keywords: enterovirus; great apes; noninvasive detection; respiratory disease; respiratory syncytial virus; western lowland gorillas
Mesh:
Year: 2016 PMID: 27436109 PMCID: PMC7088376 DOI: 10.1007/s10393-016-1144-6
Source DB: PubMed Journal: Ecohealth ISSN: 1612-9202 Impact factor: 3.184
Figure 1Map of field site.
Primers Used in This Study
| Pathogen | Assay type | Primers | Conditions described in |
|---|---|---|---|
| Adenovirus (AdV) | TaqMan PCR |
| Chmielewicz et al. |
| Corona virus (CoV) | Conventional PCR |
| Nitsche, unpublished data* |
| Enterovirus (EV) | TaqMan PCR |
| Pusch et al. |
| Human metapneumovirus (HMPV) | Two-step real-time RT-PCR for screening |
| Reiche et al. |
| Conventional confirmation PCR |
| Mackay et al. | |
| Human respiratory syncytial virus (HRSV) | TaqMan PCR for screening |
| Reiche and Schweiger |
| HRSV A | Semi-nested confirmation PCR |
| Sato et al. |
| HRSV B |
| ||
| Influenza virus A (Flu A) | Real-time PCR |
| Schulze et al. |
| Influenza virus B (Flu B) | Real-time PCR |
| Schulze et al. |
| Pan pneumovirus | Semi-nested PCR |
| Tong et al. |
| Pan paramyxovirus | Semi-nested PCR |
| Tong et al. |
| Pan picornavirus | Semi-nested PCR |
| Jang et al. |
|
| TaqMan PCR for screening |
| MacAvin et al. |
PCR performed in a total volume of 25 µl with 0.1 µl Platinum Taq polymerase (Applied Biosystems, Darmstadt, Germany), 0.75 µM of each primer in a 300 nM concentration, a 200 µM concentration of each deoxynucleoside triphosphate (dNTP), and 2 mM MgCl2; cycling conditions: 95°C for 5 min and 45 cycles of 95°C for 30 s, 60°C for 30 s, and 72°C for 1 min, with a final 7 min of extension at 72°C and an expected amplicon size of 670 bp.nnn
Overview of Findings
| Outbreak 1 (Start Feb 2012) | Outbreak 2 (Start Aug 2012) | Outbreak 3 (Start Aug 2014) | |
|---|---|---|---|
| Gorilla group | Makumba | Makumba | Mayele |
| No of individuals affected | 8 | 6 | 5 |
| Duration | Feb–Apr 2012 | Aug–Sep 2012 | Aug 2014–Feb 2015 |
| Pathogens found in gorilla fecal samples | EV (1/7) | HRSV (4/15), AdV (1/15) | EV (12/25) |
| Pathogens found in human samples (fecal samples and throat swaps) | EV (1/16), AdV (5/16) | HRSV (4/80), HMPV (1/80), RV (1/80) | N/A |
Sequences Obtained in Three Independent Outbreaks
| Sample type | No. of samples | Pan Pneu L gene ~240 bp | HRSV | HRSV | HMPV | EV | RV | |
|---|---|---|---|---|---|---|---|---|
| Outbreak 1 | ||||||||
| Gorillas | Feces | 7 | – | – | – | – | 1 | – |
| Humans | Feces | 15 | – | – | – | – |
| |
| Outbreak 2 | ||||||||
| Gorillas | Feces | 15 |
|
| 1 (poor quality) | – | – | – |
| Researcher | Throat swab | 2 | – | – | – | – | – | – |
| Researcher family member | Throat swab | 1 |
|
| 1 | – | – | – |
| Camp assistant | Throat swab | 5 |
|
| 2 | – | – | 1 |
| Tracker | Throat swab | 25 | – | – | – | – | – | – |
| Tracker family member | Throat swab | 9 |
|
| 1 | – | – | – |
| Eco-guards | Throat swab | 38 | 1 | – | – | 1 | – | – |
| Outbreak 3 | ||||||||
| Gorillas (beginning) | Feces | 10 | – | – | – | – |
| – |
| Gorillas (10 weeks later) | Feces | 15 | – | – | – | – |
| – |
Sequences identical for humans and gorillas in outbreak 2 highlighted in bold and for outbreak 1 and 3 in italics.
Figure 2Phylogenetic positions of enteroviruses found in a human and a gorilla and two years later in another gorilla group during respiratory disease outbreaks. EVs were named as follows: ‘Gor_EV_ob_1’ Gorilla Enterovirus outbreak 1, ‘Hum_EV_ob_1’ human enterovirus outbreak 1, ‘Gor_EV_ob_3’ Gorilla Enterovirus outbreak 3. This tree is a maximum clade credibility tree generated from the output of Bayesian Markov chain Monte Carlo (BMCMC) analyses. We also ran maximum likelihood (ML) analyses; the ML tree was topologically very similar. Branch robustness was assessed through posterior probabilities (BMCMC) and nonparametric bootstrapping (ML); posterior probabilities/bootstrap values are plotted above branches.