Literature DB >> 27435506

A comprehensive compilation of SUMO proteomics.

Ivo A Hendriks1,2, Alfred C O Vertegaal1.   

Abstract

Small ubiquitin-like modifiers (SUMOs) are essential for the regulation of several cellular processes and are potential therapeutic targets owing to their involvement in diseases such as cancer and Alzheimer disease. In the past decade, we have witnessed a rapid expansion of proteomic approaches for identifying sumoylated proteins, with recent advances in detecting site-specific sumoylation. In this Analysis, we combined all human SUMO proteomics data currently available into one cohesive database. We provide proteomic evidence for sumoylation of 3,617 proteins at 7,327 sumoylation sites, and insight into SUMO group modification by clustering the sumoylated proteins into functional networks. The data support sumoylation being a frequent protein modification (on par with other major protein modifications) with multiple nuclear functions, including in transcription, mRNA processing, DNA replication and the DNA-damage response.

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Year:  2016        PMID: 27435506     DOI: 10.1038/nrm.2016.81

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  149 in total

1.  SUMO-1 conjugation in vivo requires both a consensus modification motif and nuclear targeting.

Authors:  M S Rodriguez; C Dargemont; R T Hay
Journal:  J Biol Chem       Date:  2000-12-21       Impact factor: 5.157

Review 2.  Nuclear export and cytoplasmic maturation of ribosomal subunits.

Authors:  Ivo Zemp; Ulrike Kutay
Journal:  FEBS Lett       Date:  2007-05-11       Impact factor: 4.124

Review 3.  Modification in reverse: the SUMO proteases.

Authors:  Debaditya Mukhopadhyay; Mary Dasso
Journal:  Trends Biochem Sci       Date:  2007-05-17       Impact factor: 13.807

Review 4.  Concepts in sumoylation: a decade on.

Authors:  Ruth Geiss-Friedlander; Frauke Melchior
Journal:  Nat Rev Mol Cell Biol       Date:  2007-12       Impact factor: 94.444

Review 5.  Principles of ubiquitin and SUMO modifications in DNA repair.

Authors:  Steven Bergink; Stefan Jentsch
Journal:  Nature       Date:  2009-03-26       Impact factor: 49.962

Review 6.  The ubiquitin system.

Authors:  A Hershko; A Ciechanover
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

7.  Uncovering SUMOylation dynamics during cell-cycle progression reveals FoxM1 as a key mitotic SUMO target protein.

Authors:  Joost Schimmel; Karolin Eifler; Jón Otti Sigurðsson; Sabine A G Cuijpers; Ivo A Hendriks; Matty Verlaan-de Vries; Christian D Kelstrup; Chiara Francavilla; René H Medema; Jesper V Olsen; Alfred C O Vertegaal
Journal:  Mol Cell       Date:  2014-02-27       Impact factor: 17.970

8.  Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

Authors:  Jesper V Olsen; Blagoy Blagoev; Florian Gnad; Boris Macek; Chanchal Kumar; Peter Mortensen; Matthias Mann
Journal:  Cell       Date:  2006-11-03       Impact factor: 41.582

9.  RNF4, a SUMO-targeted ubiquitin E3 ligase, promotes DNA double-strand break repair.

Authors:  Yaron Galanty; Rimma Belotserkovskaya; Julia Coates; Stephen P Jackson
Journal:  Genes Dev       Date:  2012-06-01       Impact factor: 11.361

10.  Mammalian SUMO E3-ligases PIAS1 and PIAS4 promote responses to DNA double-strand breaks.

Authors:  Yaron Galanty; Rimma Belotserkovskaya; Julia Coates; Sophie Polo; Kyle M Miller; Stephen P Jackson
Journal:  Nature       Date:  2009-12-17       Impact factor: 49.962

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  165 in total

Review 1.  A conserved role for transcription factor sumoylation in binding-site selection.

Authors:  Emanuel Rosonina
Journal:  Curr Genet       Date:  2019-05-15       Impact factor: 3.886

2.  DeSUMOylation of Gli1 by SENP1 Attenuates Sonic Hedgehog Signaling.

Authors:  Huaize Liu; Sen Yan; Jie Ding; Ting-Ting Yu; Steven Y Cheng
Journal:  Mol Cell Biol       Date:  2017-08-28       Impact factor: 4.272

3.  How DNA vicinity controls SUMO E3 ligase activity.

Authors:  Andrea Pichler
Journal:  EMBO J       Date:  2018-05-24       Impact factor: 11.598

4.  SUMO protease SENP1 deSUMOylates and stabilizes c-Myc.

Authors:  Xiao-Xin Sun; Yingxiao Chen; Yulong Su; Xiaoyan Wang; Krishna Mohan Chauhan; Juan Liang; Colin J Daniel; Rosalie C Sears; Mu-Shui Dai
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-10       Impact factor: 11.205

5.  Geminivirus Replication Protein Impairs SUMO Conjugation of Proliferating Cellular Nuclear Antigen at Two Acceptor Sites.

Authors:  Manuel Arroyo-Mateos; Blanca Sabarit; Francesca Maio; Miguel A Sánchez-Durán; Tabata Rosas-Díaz; Marcel Prins; Javier Ruiz-Albert; Ana P Luna; Harrold A van den Burg; Eduardo R Bejarano
Journal:  J Virol       Date:  2018-08-29       Impact factor: 5.103

Review 6.  SERCA2a: a key protein in the Ca2+ cycle of the heart failure.

Authors:  Liu Zhihao; Ni Jingyu; Li Lan; Sarhene Michael; Guo Rui; Bian Xiyun; Liu Xiaozhi; Fan Guanwei
Journal:  Heart Fail Rev       Date:  2020-05       Impact factor: 4.214

7.  SUMO Protease SMT7 Modulates Ribosomal Protein L30 and Regulates Cell-Size Checkpoint Function.

Authors:  Yen-Ling Lin; Chin-Lin Chung; Ming-Hui Chen; Chun-Han Chen; Su-Chiung Fang
Journal:  Plant Cell       Date:  2020-02-14       Impact factor: 11.277

Review 8.  SUMO-Mediated Regulation of Nuclear Functions and Signaling Processes.

Authors:  Xiaolan Zhao
Journal:  Mol Cell       Date:  2018-08-02       Impact factor: 17.970

9.  SUMOylation of the transcription factor ZFHX3 at Lys-2806 requires SAE1, UBC9, and PIAS2 and enhances its stability and function in cell proliferation.

Authors:  Rui Wu; Jiali Fang; Mingcheng Liu; Jun A; Jinming Liu; Wenxuan Chen; Juan Li; Gui Ma; Zhiqian Zhang; Baotong Zhang; Liya Fu; Jin-Tang Dong
Journal:  J Biol Chem       Date:  2020-04-05       Impact factor: 5.157

10.  Novel signal transducer and activator of transcription 1 mutation disrupts small ubiquitin-related modifier conjugation causing gain of function.

Authors:  Elizabeth P Sampaio; Li Ding; Stacey R Rose; Phillip Cruz; Amy P Hsu; Anuj Kashyap; Lindsey B Rosen; Margery Smelkinson; Tatyana A Tavella; Elise M N Ferre; Meredith K Wierman; Christa S Zerbe; Michail S Lionakis; Steven M Holland
Journal:  J Allergy Clin Immunol       Date:  2017-08-30       Impact factor: 10.793

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