Literature DB >> 27419845

Identification of processing elements and interactors implicate SMN, coilin and the pseudogene-encoded coilp1 in telomerase and box C/D scaRNP biogenesis.

Aaron R Poole1, Isioma I Enwerem1, Ian A Vicino1, Jackson B Coole1, Stanley V Smith2, Michael D Hebert1.   

Abstract

Many cellular functions, such as translation, require ribonucleoproteins (RNPs). The biogenesis of RNPs is a multi-step process that, depending on the RNP, can take place in many cellular compartments. Here we examine 2 different RNPs: telomerase and small Cajal body-specific RNPs (scaRNPs). Both of these RNPs are enriched in the Cajal body (CB), which is a subnuclear domain that also has high concentrations of another RNP, small nuclear RNPs (snRNPs). SnRNPs are essential components of the spliceosome, and scaRNPs modify the snRNA component of the snRNP. The CB contains many proteins, including WRAP53, SMN and coilin, the CB marker protein. We show here that coilin, SMN and coilp1, a newly identified protein encoded by a pseudogene in human, associate with telomerase RNA and a subset of scaRNAs. We also have identified a processing element within box C/D scaRNA. Our findings thus further strengthen the connection between the CB proteins coilin and SMN in the biogenesis of telomeras e and box C/D scaRNPs, and reveal a new player, coilp1, that likely participates in this process.

Entities:  

Keywords:  Cajal body; Coilin; SMN; pseudogene; scaRNA; telomerase

Mesh:

Substances:

Year:  2016        PMID: 27419845      PMCID: PMC5056767          DOI: 10.1080/15476286.2016.1211224

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  57 in total

1.  Coilin forms the bridge between Cajal bodies and SMN, the spinal muscular atrophy protein.

Authors:  M D Hebert; P W Szymczyk; K B Shpargel; A G Matera
Journal:  Genes Dev       Date:  2001-10-15       Impact factor: 11.361

2.  Cell cycle-regulated trafficking of human telomerase to telomeres.

Authors:  Rebecca L Tomlinson; Tania D Ziegler; Teerawit Supakorndej; Rebecca M Terns; Michael P Terns
Journal:  Mol Biol Cell       Date:  2005-12-07       Impact factor: 4.138

3.  SMN mutants of spinal muscular atrophy patients are defective in binding to snRNP proteins.

Authors:  L Pellizzoni; B Charroux; G Dreyfuss
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-28       Impact factor: 11.205

4.  The coilin interactome identifies hundreds of small noncoding RNAs that traffic through Cajal bodies.

Authors:  Martin Machyna; Stephanie Kehr; Korinna Straube; Dennis Kappei; Frank Buchholz; Falk Butter; Jernej Ule; Jana Hertel; Peter F Stadler; Karla M Neugebauer
Journal:  Mol Cell       Date:  2014-11-06       Impact factor: 17.970

5.  The product of the survival of motor neuron (SMN) gene is a human telomerase-associated protein.

Authors:  François Bachand; François-Michel Boisvert; Jocelyn Côté; Stéphane Richard; Chantal Autexier
Journal:  Mol Biol Cell       Date:  2002-09       Impact factor: 4.138

Review 6.  SMN-mediated assembly of RNPs: a complex story.

Authors:  Gunter Meister; Christian Eggert; Utz Fischer
Journal:  Trends Cell Biol       Date:  2002-10       Impact factor: 20.808

Review 7.  At the "junction" of spinal muscular atrophy pathogenesis: the role of neuromuscular junction dysfunction in SMA disease progression.

Authors:  B B Goulet; R Kothary; R J Parks
Journal:  Curr Mol Med       Date:  2013-08       Impact factor: 2.222

8.  Targeting vertebrate intron-encoded box C/D 2'-O-methylation guide RNAs into the Cajal body.

Authors:  Aline Marnef; Patrica Richard; Natalia Pinzón; Tamás Kiss
Journal:  Nucleic Acids Res       Date:  2014-04-20       Impact factor: 16.971

9.  The scaRNA2 is produced by an independent transcription unit and its processing is directed by the encoding region.

Authors:  Marie-Aline Gérard; Evelyne Myslinski; Natassia Chylak; Stéphanie Baudrey; Alain Krol; Philippe Carbon
Journal:  Nucleic Acids Res       Date:  2009-11-11       Impact factor: 16.971

10.  Phosphorylation regulates coilin activity and RNA association.

Authors:  Hanna J Broome; Zunamys I Carrero; Heather E Douglas; Michael D Hebert
Journal:  Biol Open       Date:  2013-02-26       Impact factor: 2.422

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  8 in total

1.  Regulatory RNPs: a novel class of ribonucleoproteins that potentially contribute to ribosome heterogeneity.

Authors:  Aaron R Poole; Ian Vicino; Hironori Adachi; Yi-Tao Yu; Michael D Hebert
Journal:  Biol Open       Date:  2017-09-15       Impact factor: 2.422

2.  Altered dynamics of scaRNA2 and scaRNA9 in response to stress correlates with disrupted nuclear organization.

Authors:  Madelyn K Logan; Marilyn F Burke; Michael D Hebert
Journal:  Biol Open       Date:  2018-09-27       Impact factor: 2.422

3.  Alteration of 28S rRNA 2'-O-methylation by etoposide correlates with decreased SMN phosphorylation and reduced Drosha levels.

Authors:  Marilyn F Burke; Douglas M McLaurin; Madelyn K Logan; Michael D Hebert
Journal:  Biol Open       Date:  2019-03-27       Impact factor: 2.422

4.  Molecular determinants that govern scaRNA processing by Drosha/DGCR8.

Authors:  Douglas M McLaurin; Madelyn K Logan; Katheryn E Lett; Michael D Hebert
Journal:  Biol Open       Date:  2020-10-26       Impact factor: 2.422

5.  Synergistic interactions between Cajal bodies and the miRNA processing machinery.

Authors:  Madelyn K Logan; Douglas M McLaurin; Michael D Hebert
Journal:  Mol Biol Cell       Date:  2020-05-20       Impact factor: 4.138

Review 6.  Pseudogenes and Liquid Phase Separation in Epigenetic Expression.

Authors:  Bernard Nsengimana; Faiz Ali Khan; Usman Ayub Awan; Dandan Wang; Na Fang; Wenqiang Wei; Weijuan Zhang; Shaoping Ji
Journal:  Front Oncol       Date:  2022-07-08       Impact factor: 5.738

7.  Coilin as a regulator of NF-kB mediated inflammation in preeclampsia.

Authors:  Madelyn K Logan; Katheryn E Lett; Douglas M McLaurin; Michael D Hebert
Journal:  Biol Open       Date:  2022-07-25       Impact factor: 2.643

8.  Coilin enhances phosphorylation and stability of DGCR8 and promotes miRNA biogenesis.

Authors:  Katheryn E Lett; Madelyn K Logan; Douglas M McLaurin; Michael D Hebert
Journal:  Mol Biol Cell       Date:  2021-07-28       Impact factor: 4.138

  8 in total

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