Literature DB >> 27417136

An Internal Disulfide Locks a Misfolded Aggregation-prone Intermediate in Cataract-linked Mutants of Human γD-Crystallin.

Eugene Serebryany1, Jaie C Woodard2, Bharat V Adkar2, Mohammed Shabab1, Jonathan A King3, Eugene I Shakhnovich4.   

Abstract

Considerable mechanistic insight has been gained into amyloid aggregation; however, a large number of non-amyloid protein aggregates are considered "amorphous," and in most cases, little is known about their mechanisms. Amorphous aggregation of γ-crystallins in the eye lens causes cataract, a widespread disease of aging. We combined simulations and experiments to study the mechanism of aggregation of two γD-crystallin mutants, W42R and W42Q: the former a congenital cataract mutation, and the latter a mimic of age-related oxidative damage. We found that formation of an internal disulfide was necessary and sufficient for aggregation under physiological conditions. Two-chain all-atom simulations predicted that one non-native disulfide in particular, between Cys(32) and Cys(41), was likely to stabilize an unfolding intermediate prone to intermolecular interactions. Mass spectrometry and mutagenesis experiments confirmed the presence of this bond in the aggregates and its necessity for oxidative aggregation under physiological conditions in vitro Mining the simulation data linked formation of this disulfide to extrusion of the N-terminal β-hairpin and rearrangement of the native β-sheet topology. Specific binding between the extruded hairpin and a distal β-sheet, in an intermolecular chain reaction similar to domain swapping, is the most probable mechanism of aggregate propagation.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  all-atom Monte Carlo simulation; cataract; crystallin; disulfide; domain swapping; oxidative stress; protein aggregation; protein misfolding; unfolding intermediate

Mesh:

Substances:

Year:  2016        PMID: 27417136      PMCID: PMC5009285          DOI: 10.1074/jbc.M116.735977

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  77 in total

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Review 2.  Folding of small disulfide-rich proteins: clarifying the puzzle.

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Journal:  Trends Biochem Sci       Date:  2006-04-05       Impact factor: 13.807

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4.  A protein caught in a kinetic trap: structures and stabilities of insulin disulfide isomers.

Authors:  Qing-Xin Hua; Wenhua Jia; Bruce H Frank; Nelson F B Phillips; Michael A Weiss
Journal:  Biochemistry       Date:  2002-12-17       Impact factor: 3.162

5.  Wild-type human γD-crystallin promotes aggregation of its oxidation-mimicking, misfolding-prone W42Q mutant.

Authors:  Eugene Serebryany; Jonathan A King
Journal:  J Biol Chem       Date:  2015-03-18       Impact factor: 5.157

6.  Charges in the hydrophobic interior of proteins.

Authors:  Daniel G Isom; Carlos A Castañeda; Brian R Cannon; Priya D Velu; Bertrand García-Moreno E
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-26       Impact factor: 11.205

7.  Lanosterol reverses protein aggregation in cataracts.

Authors:  Ling Zhao; Xiang-Jun Chen; Jie Zhu; Yi-Bo Xi; Xu Yang; Li-Dan Hu; Hong Ouyang; Sherrina H Patel; Xin Jin; Danni Lin; Frances Wu; Ken Flagg; Huimin Cai; Gen Li; Guiqun Cao; Ying Lin; Daniel Chen; Cindy Wen; Christopher Chung; Yandong Wang; Austin Qiu; Emily Yeh; Wenqiu Wang; Xun Hu; Seanna Grob; Ruben Abagyan; Zhiguang Su; Harry Christianto Tjondro; Xi-Juan Zhao; Hongrong Luo; Rui Hou; J Jefferson; P Perry; Weiwei Gao; Igor Kozak; David Granet; Yingrui Li; Xiaodong Sun; Jun Wang; Liangfang Zhang; Yizhi Liu; Yong-Bin Yan; Kang Zhang
Journal:  Nature       Date:  2015-07-22       Impact factor: 49.962

8.  Disulfide-linked high molecular weight protein associated with human cataract.

Authors:  A Spector; D Roy
Journal:  Proc Natl Acad Sci U S A       Date:  1978-07       Impact factor: 11.205

9.  Influence of preformed Asp23-Lys28 salt bridge on the conformational fluctuations of monomers and dimers of Abeta peptides with implications for rates of fibril formation.

Authors:  Govardhan Reddy; John E Straub; D Thirumalai
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10.  α-Synuclein occurs physiologically as a helically folded tetramer that resists aggregation.

Authors:  Tim Bartels; Joanna G Choi; Dennis J Selkoe
Journal:  Nature       Date:  2011-08-14       Impact factor: 49.962

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  22 in total

1.  Amyloid found in human cataracts with two-dimensional infrared spectroscopy.

Authors:  Ariel M Alperstein; Joshua S Ostrander; Tianqi O Zhang; Martin T Zanni
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-20       Impact factor: 11.205

Review 2.  Function and Aggregation in Structural Eye Lens Crystallins.

Authors:  Kyle W Roskamp; Carolyn N Paulson; William D Brubaker; Rachel W Martin
Journal:  Acc Chem Res       Date:  2020-04-09       Impact factor: 22.384

Review 3.  Chemistry and Enzymology of Disulfide Cross-Linking in Proteins.

Authors:  Deborah Fass; Colin Thorpe
Journal:  Chem Rev       Date:  2017-07-12       Impact factor: 60.622

4.  Kinetic Stability of Long-Lived Human Lens γ-Crystallins and Their Isolated Double Greek Key Domains.

Authors:  Ishara A Mills-Henry; Shannon L Thol; Melissa S Kosinski-Collins; Eugene Serebryany; Jonathan A King
Journal:  Biophys J       Date:  2019-06-14       Impact factor: 4.033

5.  Reactive cysteine residues in the oxidative dimerization and Cu2+ induced aggregation of human γD-crystallin: Implications for age-related cataract.

Authors:  Srinivasagan Ramkumar; Xingjun Fan; Benlian Wang; Sichun Yang; Vincent M Monnier
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2018-08-18       Impact factor: 5.187

6.  Human γS-Crystallin-Copper Binding Helps Buffer against Aggregation Caused by Oxidative Damage.

Authors:  Kyle W Roskamp; Sana Azim; Günther Kassier; Brenna Norton-Baker; Marc A Sprague-Piercy; R J Dwyane Miller; Rachel W Martin
Journal:  Biochemistry       Date:  2020-06-12       Impact factor: 3.162

7.  Mercury-induced aggregation of human lens γ-crystallins reveals a potential role in cataract disease.

Authors:  J A Domínguez-Calva; M L Pérez-Vázquez; E Serebryany; J A King; L Quintanar
Journal:  J Biol Inorg Chem       Date:  2018-08-30       Impact factor: 3.358

8.  Dynamic disulfide exchange in a crystallin protein in the human eye lens promotes cataract-associated aggregation.

Authors:  Eugene Serebryany; Shuhuai Yu; Sunia A Trauger; Bogdan Budnik; Eugene I Shakhnovich
Journal:  J Biol Chem       Date:  2018-09-21       Impact factor: 5.157

Review 9.  Chemical Properties Determine Solubility and Stability in βγ-Crystallins of the Eye Lens.

Authors:  Megan A Rocha; Marc A Sprague-Piercy; Ashley O Kwok; Kyle W Roskamp; Rachel W Martin
Journal:  Chembiochem       Date:  2021-02-10       Impact factor: 3.164

10.  Mechanism of human γD-crystallin protein aggregation in UV-C light.

Authors:  Mangesh Bawankar; Ashwani Kumar Thakur
Journal:  Mol Vis       Date:  2021-07-01       Impact factor: 2.367

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