Literature DB >> 27409399

Findings made in gene panel to whole genome sequencing: data, knowledge, ethics - and consequences?

Eva C Winkler1, Stefan Wiemann2,3.   

Abstract

INTRODUCTION: Improvements in sequencing technologies have helped to refine diagnosis and patient stratification via molecular genetic testing for a number of conditions. Consequently, sequencing has increasingly entered clinical routine. Reduced cost, combined with enhanced throughput has helped to place sequencing also in the commercial market thus moving beyond particular indications. Diverse kinds of sequencing approaches are applied, ranging from gene panel to whole-genome sequencing. All these have proven successful in the identification of causal and therapeutically relevant alterations to the benefit of patients. However, a number of technical and ethical issues induce challenges that require their appreciation, societal discussion and consensual decision. Areas covered: In the following paper, advantages and disadvantages of different DNA sequencing strategies towards their application within and outside a clinical context are discussed particularly in the light of the incidence and impact genetic findings have at the personal as well as societal level. Expert commentary: We regard the comprehensive education of citizens about these challenges a prerequisite to reach a societal consensus on the exploitation of the huge opportunities while not neglecting the potential and real dangers that are associated with the resulting data.

Entities:  

Keywords:  Genome sequencing; additional findings; consent; ethics; exome sequencing; gene panel; genetic variation

Mesh:

Year:  2016        PMID: 27409399     DOI: 10.1080/14737159.2016.1212662

Source DB:  PubMed          Journal:  Expert Rev Mol Diagn        ISSN: 1473-7159            Impact factor:   5.225


  6 in total

1.  Genetic landscape of pancreatic adenocarcinoma patients: a pilot study from Pakistan.

Authors:  Saleema Mehboob Ali; Yumna Adnan; Zubair Ahmad; Hasnain Ahmed Farooqui; Tabish Chawla; S M Adnan Ali
Journal:  Mol Biol Rep       Date:  2021-11-23       Impact factor: 2.316

2.  The Dynamics of Nucleotide Variants in the Progression from Low-Intermediate Myeloma Precursor Conditions to Multiple Myeloma: Studying Serial Samples with a Targeted Sequencing Approach.

Authors:  Bénedith Oben; Charlotte Cosemans; Ellen Geerdens; Loes Linsen; Kimberly Vanhees; Brigitte Maes; Koen Theunissen; Bert Cruys; Marta Lionetti; Ingrid Arijs; Niccolò Bolli; Guy Froyen; Jean-Luc Rummens
Journal:  Cancers (Basel)       Date:  2022-02-18       Impact factor: 6.639

3.  Universal molecular screening does not effectively detect Lynch syndrome in clinical practice.

Authors:  Beatrice Brennan; Christine T Hemmings; Ian Clark; Desmond Yip; Mitali Fadia; Douglas R Taupin
Journal:  Therap Adv Gastroenterol       Date:  2017-02-09       Impact factor: 4.409

4.  Genetic tests by next-generation sequencing in children with developmental delay and/or intellectual disability.

Authors:  Ji Yoon Han; In Goo Lee
Journal:  Clin Exp Pediatr       Date:  2019-11-04

5.  Perceptions of students in health and molecular life sciences regarding pharmacogenomics and personalized medicine.

Authors:  Lejla Mahmutovic; Betul Akcesme; Camil Durakovic; Faruk Berat Akcesme; Aida Maric; Muhamed Adilovic; Nour Hamad; Matthias Wjst; Oliver Feeney; Sabina Semiz
Journal:  Hum Genomics       Date:  2018-11-14       Impact factor: 4.639

6.  Improved diagnostic yield compared with targeted gene sequencing panels suggests a role for whole-genome sequencing as a first-tier genetic test.

Authors:  Anath C Lionel; Gregory Costain; Nasim Monfared; Susan Walker; Miriam S Reuter; S Mohsen Hosseini; Bhooma Thiruvahindrapuram; Daniele Merico; Rebekah Jobling; Thomas Nalpathamkalam; Giovanna Pellecchia; Wilson W L Sung; Zhuozhi Wang; Peter Bikangaga; Cyrus Boelman; Melissa T Carter; Dawn Cordeiro; Cheryl Cytrynbaum; Sharon D Dell; Priya Dhir; James J Dowling; Elise Heon; Stacy Hewson; Linda Hiraki; Michal Inbar-Feigenberg; Regan Klatt; Jonathan Kronick; Ronald M Laxer; Christoph Licht; Heather MacDonald; Saadet Mercimek-Andrews; Roberto Mendoza-Londono; Tino Piscione; Rayfel Schneider; Andreas Schulze; Earl Silverman; Komudi Siriwardena; O Carter Snead; Neal Sondheimer; Joanne Sutherland; Ajoy Vincent; Jonathan D Wasserman; Rosanna Weksberg; Cheryl Shuman; Chris Carew; Michael J Szego; Robin Z Hayeems; Raveen Basran; Dimitri J Stavropoulos; Peter N Ray; Sarah Bowdin; M Stephen Meyn; Ronald D Cohn; Stephen W Scherer; Christian R Marshall
Journal:  Genet Med       Date:  2017-08-03       Impact factor: 8.822

  6 in total

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