Literature DB >> 27401136

Experimental models for dynamic compartmentalization of biomolecules in liquid organelles: Reversible formation and partitioning in aqueous biphasic systems.

William M Aumiller1, Christine D Keating2.   

Abstract

Living cells contain numerous subcellular compartments, many of which lack membranous boundaries and are thought to occur due to liquid-liquid phase coexistence. This review will introduce these biological membraneless organelles and discuss simple experimental models based on liquid-liquid phase separation in polymer solutions. When more than one phase is present, solutes such as proteins or nucleic acids can be compartmentalized by partitioning into one of the phases. This could confer benefits to the cell such as enhanced reaction rates or sequestration of toxic molecules. Liquid-like compartments inside living cells are often dynamic, for example, appearing and disappearing in response to stimuli and/or at different points in the cell cycle. We will discuss mechanisms by which phase transitions can be induced in the laboratory and inside living cells, with special emphasis on regulating phase formation by phosphorylation state. This work is motivated by a desire to understand the physical and chemical mechanisms that underlie biological processes and to enable new nonbiological applications.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Aqueous two-phase system; Coacervate; Droplet; Intrinsically disordered protein; Phosphorylation

Year:  2016        PMID: 27401136     DOI: 10.1016/j.cis.2016.06.011

Source DB:  PubMed          Journal:  Adv Colloid Interface Sci        ISSN: 0001-8686            Impact factor:   12.984


  17 in total

1.  Liquid-liquid phase separation in artificial cells.

Authors:  Charles D Crowe; Christine D Keating
Journal:  Interface Focus       Date:  2018-08-17       Impact factor: 3.906

2.  The interplay of spatial organization and biochemistry in building blocks of cellular signalling pathways.

Authors:  J Krishnan; Lingjun Lu; Aiman Alam Nazki
Journal:  J R Soc Interface       Date:  2020-05-27       Impact factor: 4.118

3.  Manipulating the aggregation activity of human prion-like proteins.

Authors:  Sean M Cascarina; Kacy R Paul; Eric D Ross
Journal:  Prion       Date:  2017-09-03       Impact factor: 3.931

4.  Lipid Vesicle-Coated Complex Coacervates.

Authors:  Fatma Pir Cakmak; Alex T Grigas; Christine D Keating
Journal:  Langmuir       Date:  2019-05-24       Impact factor: 3.882

Review 5.  Phase-Separated Subcellular Compartmentation and Related Human Diseases.

Authors:  Lin Zhang; Shubo Wang; Wenmeng Wang; Jinming Shi; Daniel B Stovall; Dangdang Li; Guangchao Sui
Journal:  Int J Mol Sci       Date:  2022-05-14       Impact factor: 6.208

Review 6.  Macromolecular Crowding In Vitro, In Vivo, and In Between.

Authors:  Germán Rivas; Allen P Minton
Journal:  Trends Biochem Sci       Date:  2016-09-23       Impact factor: 13.807

Review 7.  Nonspecific characteristics of macromolecules create specific effects in living cells.

Authors:  Kanta Tsumoto; Hiroki Sakuta; Kingo Takiguchi; Kenichi Yoshikawa
Journal:  Biophys Rev       Date:  2020-03-06

Review 8.  Protein Aggregation Landscape in Neurodegenerative Diseases: Clinical Relevance and Future Applications.

Authors:  Niccolò Candelise; Silvia Scaricamazza; Illari Salvatori; Alberto Ferri; Cristiana Valle; Valeria Manganelli; Tina Garofalo; Maurizio Sorice; Roberta Misasi
Journal:  Int J Mol Sci       Date:  2021-06-02       Impact factor: 5.923

9.  Specific Spatial Localization of Actin and DNA in a Water/Water Microdroplet: Self-Emergence of a Cell-Like Structure.

Authors:  Naoki Nakatani; Hiroki Sakuta; Masahito Hayashi; Shunsuke Tanaka; Kingo Takiguchi; Kanta Tsumoto; Kenichi Yoshikawa
Journal:  Chembiochem       Date:  2018-06-01       Impact factor: 3.164

10.  Liquid-liquid phase separation induces pathogenic tau conformations in vitro.

Authors:  Nicholas M Kanaan; Chelsey Hamel; Tessa Grabinski; Benjamin Combs
Journal:  Nat Commun       Date:  2020-06-04       Impact factor: 14.919

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