Literature DB >> 27388427

Forensic Spanish allele and haplotype database for a 17 X-STR panel.

Endika Prieto-Fernández1, Carolina Núñez1, Miriam Baeta1, Susana Jiménez-Moreno2, Begoña Martínez-Jarreta3, Marian M de Pancorbo4.   

Abstract

The currently developed 17 X-STR panel (DXS8378, DXS9898, DXS7133, GATA31E08, GATA172D05, DXS6801, DXS7423, DXS6809, DXS6799, DXS7132, DXS9902, DXS6800, DXS6789, DXS10075, DXS10079, DXS6807, and DXS6803) offers a highly discriminative tool for forensic identification and kinship testing. With the aim of providing a global Spanish population X-STR database, we present haplotype and allele frequencies and parameters of forensic interest for the 17 X-STR panel obtained from 593 unrelated individuals from Alicante, Aragon, the Basque Country, Andalusia, Galicia, Madrid, and Barcelona that represent the most populated regions of the Spanish Peninsular territory. The seven populations were compared to test possible population genetic substructures. The lack of significant differences among the studied Spanish populations supports the use of the allele and haplotype frequency database presented herein as a global Spanish population sample useful for statistical evaluation in forensic casework. After conducting the LD plots derived from HapMap and pairwise linkage disequilibrium tests, DXS7132, DXS10075, and DXS10079 markers were included in a cluster and haplotype frequencies were calculated. The improvement in the forensic parameters for the Spanish population using 17 X-STRs in comparison to the previous 10 X-STR allele frequencies database is also shown.
Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  17 X-STRs; Database; Forensic; Haplotype; Linkage disequilibrium

Mesh:

Year:  2016        PMID: 27388427     DOI: 10.1016/j.fsigen.2016.06.016

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  2 in total

1.  Study of 17 X-STRs in Native American and Mestizo populations of Central America for forensic and population purposes.

Authors:  Miriam Baeta; Endika Prieto-Fernández; Carolina Núñez; Tamara Kleinbielen; Patricia Villaescusa; Leire Palencia-Madrid; Oscar Alvarez-Gila; Begoña Martínez-Jarreta; Marian M de Pancorbo
Journal:  Int J Legal Med       Date:  2021-03-19       Impact factor: 2.686

2.  Analysis of four novel X-chromosomal short tandem repeats within 71 kb of the Xp22.3 region.

Authors:  Takeki Nishi; Kenji Fukui; Kimiharu Iwadate
Journal:  Int J Legal Med       Date:  2017-02-27       Impact factor: 2.686

  2 in total

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