| Literature DB >> 27387437 |
Brandt W Meixell1,2, Todd W Arnold3, Mark S Lindberg4, Matthew M Smith5, Jonathan A Runstadler6, Andrew M Ramey5.
Abstract
BACKGROUND: The epidemiology of avian hematozoa at high latitudes is still not well understood, particularly in sub-Arctic and Arctic habitats, where information is limited regarding seasonality and range of transmission, co-infection dynamics with parasitic and viral agents, and possible fitness consequences of infection. Such information is important as climate warming may lead to northward expansion of hematozoa with unknown consequences to northern-breeding avian taxa, particularly populations that may be previously unexposed to blood parasites.Entities:
Keywords: Blood parasites; Co-infection; Detection probability; Haemoproteus; Hematozoa; Influenza A Virus; Leucocytozoon; Occupancy models; Plasmodium; Waterfowl
Mesh:
Substances:
Year: 2016 PMID: 27387437 PMCID: PMC4936110 DOI: 10.1186/s13071-016-1666-3
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Fig. 1Study area and capture locations within Minto Flats State Game Refuge, Alaska, USA. Circles depict capture locations relative to monthly sampling intervals (yellow = 17–27 May, orange = 10–19 June, red = 28 July – 20 August) and number of birds sampled (small = 1–25, medium = 26–100, large = 100–200)
Sample sizes, number of positives, and apparent prevalence (in parentheses) of hematozoa, Influenza A Virus (IAV), and IAV serostatus (Ser)
| Species | Age | Sex | Sampling month(s) |
| Leuc | Haem | Plas | AIV | Ser | Leuc & Haem | Leuc & Plas | Leuc & AIV | Haem & AIV | Plas & AIV | Leuc & Ser | Haem & Ser | Plas & Ser |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MALL | Ad | M | May, Jun, Aug | 137 | 91 (66) | 71 (52) | 4 (3) | 27 (20) | 56 (41) | 51 (37) | 4 (3) | 19 (14) | 11 (8) | 2 (1) | 40 (29) | 30 (22) | 2 (1) |
| F | May, Jun, Aug | 115 | 57 (50) | 30 (26) | 9 (8) | 15 (13) | 41 (36) | 20 (17) | 4 (3) | 8 (7) | 4 (3) | 0 (0) | 18 (16) | 12 (10) | 3 (3) | ||
| Juv | M | Aug | 118 | 13 (11) | 6 (5) | 18 (15) | 21 (18) | 10 (8) | 1 (1) | 2 (2) | 3 (3) | 4 (3) | 5 (4) | 1 (1) | 1 (1) | 3 (3) | |
| F | Aug | 111 | 13 (12) | 5 (5) | 9 (8) | 16 (14) | 14 (13) | 1 (1) | 1 (1) | 2 (2) | 0 (0) | 0 (0) | 1 (1) | 3 (3) | 0 (0) | ||
| NOPI | Ad | M | May, Jun, Aug | 105 | 47 (45) | 20 (19) | 5 (5) | 3 (3) | 35 (33) | 13 (12) | 3 (3) | 1 (1) | 0 (0) | 0 (0) | 19 (18) | 9 (9) | 2 (2) |
| F | May, Jun, Aug | 142 | 82 (58) | 47 (33) | 32 (23) | 9 (6) | 46 (32) | 30 (21) | 16 (11) | 4 (3) | 3 (2) | 2 (1) | 31 (22) | 17 (12) | 10 (7) | ||
| Juv | M | Aug | 119 | 47 (39) | 8 (7) | 35 (29) | 8 (7) | 11 (9) | 5 (4) | 16 (13) | 2 (2) | 0 (0) | 2 (2) | 7 (6) | 1 (1) | 5 (4) | |
| F | Aug | 124 | 47 (38) | 8 (6) | 42 (34) | 10 (8) | 11 (9) | 4 (3) | 20 (16) | 4 (3) | 2 (2) | 4 (3) | 2 (2) | 0 (0) | 3 (2) | ||
| AGWT | Ad | M | Aug | 54 | 29 (54) | 13 (24) | 1 (2) | 3 (6) | 22 (41) | 9 (17) | 1 (2) | 2 (4) | 0 (0) | 0 (0) | 12 (22) | 5 (9) | 0 (0) |
| F | Aug | 29 | 19 (66) | 10 (34) | 3 (10) | 2 (7) | 8 (28) | 9 (31) | 2 (7) | 1 (3) | 1 (3) | 0 (0) | 4 (14) | 1 (3) | 1 (3) | ||
| Juv | M | Aug | 101 | 29 (29) | 6 (6) | 9 (9) | 10 (10) | 10 (10) | 4 (4) | 2 (2) | 4 (4) | 1 (1) | 0 (0) | 2 (2) | 0 (0) | 1 (1) | |
| F | Aug | 44 | 7 (16) | 1 (2) | 3 (7) | 5 (11) | 7 (16) | 0 (0) | 0 (0) | 2 (5) | 0 (0) | 1 (2) | 0 (0) | 0 (0) | 2 (5) | ||
| AMWI | Ad | M | May, Jun | 76 | 66 (87) | 39 (51) | 6 (8) | 2 (3) | 5 (7) | 36 (47) | 6 (8) | 1 (1) | 1 (1) | 0 (0) | 5 (7) | 2 (3) | 2 (3) |
| F | May, Jun | 12 | 8 (67) | 2 (17) | 0 (0) | 0 (0) | 1 (8) | 2 (17) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 1 (8) | 0 (0) | 0 (0) | ||
| LESC | Ad | M | May | 48 | 31 (65) | 13 (27) | 3 (6) | 0 (0) | 12 (25) | 10 (21) | 1 (2) | 0 (0) | 0 (0) | 0 (0) | 9 (19) | 5 (10) | 0 (0) |
| F | May | 12 | 2 (17) | 3 (25) | 0 (0) | 0 (0) | 3 (25) | 1 (8) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 1 (8) | 1 (8) | 0 (0) | ||
| Total | 1347 | 588 (44) | 282 (21) | 179 (13) | 131 (10) | 292 (22) | 196 (15) | 78 (6) | 53 (4) | 27 (2) | 16 (1) | 153 (11) | 87 (6) | 34 (3) |
Hematozoa genera were abbreviated (Leuc Leucocytozoon, Haem Haemoproteus, Plas Plasmodium) and the “&” indicates co-infections with multiple hematozoa genera and/or IAV and Serostatus. Sampling month refers to the intervals when birds were sampled (May = 17 May – 27 May; Jun = 10 June – 19 June; Aug = 28 July – 20 August). Age was classified as adult (Ad) or juvenile (Juv). Species abbreviations: MALL mallard, NOPI northern pintail, AGWT American green-winged teal, AMWI American wigeon, LESC lesser scaup
Suite of models considered in Stage 1 to estimate probability of hematozoa infection (Ψ) and probability of detecting hematozoa mtDNA (p)
| Model | K | Model description |
|---|---|---|
| (.) | 1 | pr (infection) does not vary |
| month | 3 | pr (infection) varies by month (May, June, August) |
| May models (17 May – 27 May) | ||
| sex | 2 | pr (infection) varies during May by sex |
| species | 4 | pr (infection) varies during May by species (MALL, NOPI, AMWI, LESC) |
| species + sex | 5 | pr (infection) varies during May by species and by sex to the same degree for all species |
| June models (10 July – 19 June) | ||
| sex | 2 | pr (infection) varies during June by sex |
| species | 3 | pr (infection) varies during June by species (MALL, NOPI, AMWI) |
| species + sex | 4 | pr (infection) varies during June by species and by sex to the same degree for all species |
| August models (28 July – 20 August)a | ||
| age | 2 | pr (infection) varies during August by age (adult, juvenile) |
| sex | 2 | pr (infection) varies during August by sex |
| age + sex | 3 | pr (infection) varies during August by age and by sex to the same degree for both age classes |
| age * sex | 4 | pr (infection) varies during August by each age and sex class |
| (ad * sex) + (juv) | 3 | pr (infection) varies during August by age and by sex for adult birds |
| species | 3 | pr (infection) varies during August by species (MALL, NOPI, AGWT) |
| species * age | 6 | pr (infection) varies during August by species and age |
| species + age | 4 | pr (infection) varies during August by species and by age to the same degree for all species |
| species * sex | 6 | pr (infection) varies during August by species and sex |
| species + sex | 4 | pr (infection) varies during August by species and by sex to the same degree for all species |
| species * age + sex | 7 | pr (infection) varies during August by species and age, and by sex to the same degree for all species |
| species * sex + age | 7 | pr (infection) varies during August by species and sex, and by age to the same degree for all species |
| species * age * sex | 12 | pr (infection) varies during August by species, age, and sex |
| (ad * species * sex) + (juv * species) | 9 | pr (infection) varies during August by species and by sex for adult birds |
| August temporal trend models | ||
| + day | 1 | pr (infection) during August varies in a linear trend with a single slope for all sources of variation |
| + day * ageb | 2 | pr (infection) during August varies in a linear trend with a unique slope for each age class |
| * day | 2+ | pr (infection) during August varies in a linear trend with a unique slope for each source of variation |
This suite of models was considered independently for each of three hematozoa genera (Leucocytozoon, Haemoproteus, Plasmodium). K = number of model parameters applicable only to modeling of Ψ or p in a given month and is not representative of the total number of model parameters. Age of birds was either after-hatch-year (adult) or hatch-year (juvenile). Species abbreviations: AGWT American green-winged teal, AMWI American wigeon, LESC lesser scaup, MALL mallard, NOPI northern pintail
aAugust models were considered alone, with the additive temporal trend (+ day), with the temporal trend varying by age (+ day * age), and with the multiplicative temporal trend (* day)
bModel structure was applied only to August models containing variation in age
Suite of models considered in Stage 2 and Stage 3 to estimate probability of hematozoa infection (Ψ)
| Model | K | Model description |
|---|---|---|
| Stage 2 – Co-infection modelsa | ||
| Stage 1 | 0 | pr (infection) varies by top supported model structure from Stage 1 |
| Haem | 1 | pr (infection) varies by Stage 1 and by co-infection with |
| Leuc | 1 | pr (infection) varies by Stage 1 and by co-infection with |
| Plas | 1 | pr (infection) varies by Stage 1 and by co-infection with |
| IAV | 1 | pr (infection) varies by Stage 1 and by co-infection with Influenza A Virus |
| Serostatus | 1 | pr (infection) varies by Stage 1 and by Influenza A Virus serostatus |
| Co-infection variation | ||
| * month | 3 | pr (infection) varies by Stage 1 and by co-infection differently for each month |
| * species | 5 | pr (infection) varies by Stage 1 and by co-infection differently for each duck species |
| * age | 2 | pr (infection) varies by Stage 1 and by co-infection differently for each age class |
| * sex | 2 | pr (infection) varies by Stage 1 and by co-infection differently for each sex class |
| Stage 3 – Body condition models | ||
| Stage 2 | 0 | pr (infection) varies by top supported model structure from Stage 2 |
| BCI | 1 | pr (infection) varies by Stage 2 and by body condition |
| BCI * month | 3 | pr (infection) varies by Stage 2 and by body condition effect that is different for each month |
| BCI * species | 5 | pr (infection) varies by Stage 2 and by body condition effect that is different for each species |
| BCI * age | 2 | pr (infection) varies by Stage 2 and by body condition effect that is different for each age class |
| BCI * sex | 2 | pr (infection) varies by Stage 2 and by body condition effect that is different for each sex class |
Models were considered independently for each of three hematozoa genera (Leucocytozoon, Haemoproteus, Plasmodium) and were applied only to estimation of Ψ. K = number of model parameters in addition to those supported in the previous stage of model selection and BCI is the body condition index
aEach co-infecting agent was considered alone, and varying multiplicatively with co-infection variation structures
Top AICc approximating model explaining variation in detection probability (p) and probability of infection (Ψ) for three hematozoa genera following three stages of model selection
| Top approximating model | |||
|---|---|---|---|
| Parasite genus | Model stage |
| Ψ |
| Leuc | Stage 1 |
| ΨMay(spp + sex) + ΨJun(spp) + ΨAug(spp * age) + (age * day)) |
| Stage 2 | -- | Stage 1 + Haem | |
| Stage 3 | -- | Stage 2 + (BCI * spp) | |
| Haem | Stage 1 |
| ΨMay(spp + sex) + ΨJun(spp) + ΨAug((ad * spp * sex) + (juv * spp)) |
| Stage 2 | -- | Stage 1 + Leuc | |
| Stage 3 | -- | Stage 2 + (BCI * age) | |
| Plas | Stage 1 |
| ΨMay(sex) + ΨJun(spp + sex) + ΨAug((spp + age) * day) |
| Stage 2 | -- | Stage 1 | |
| Stage 3 | -- | Stage 2 | |
Model structure explaining variation in p was fixed following Stage 1 for additional investigation of variation on Ψ in Stages 2 and 3. Abbreviations: Leuc Leucocytozoon, Haem Haemoproteus, Plas Plasmodium, spp duck species, ad age class adult, juv age class juvenile
Estimates of monthly detection probability for Leucocytozoon, Haemoproteus, and Plasmodium parasites for a single PCR run
| May | June | August | |||||
|---|---|---|---|---|---|---|---|
| Parasite | Class |
| SE |
| SE |
| SE |
|
| All | 0.90 | 0.02 | 0.97 | 0.02 | ||
| ad - M | 0.67, 0.93, 0.99 | 0.07, 0.02, 0.01 | |||||
| ad - F | 0.80, 0.85, 0.90 | 0.05, 0.03, 0.05 | |||||
| juv | 0.74, 0.86, 0.93 | 0.07, 0.02, 0.02 | |||||
|
| All | 0.85 | 0.03 | 0.85 | 0.04 | ||
| AGWT - ad | 0.98 | 0.01 | |||||
| MALL - ad | 0.91 | 0.03 | |||||
| NOPI - ad | 0.97 | 0.02 | |||||
| AGWT - juv | 0.81 | 0.11 | |||||
| MALL - juv | 0.41 | 0.13 | |||||
| NOPI - juv | 0.69 | 0.09 | |||||
|
| All | 0.86 | 0.02 | (applies to all months) | |||
Ducks were sampled in three distinct capture intervals: May (17 May – 27 May), June (10 June – 19 June), and August (28 July – 20 August). Estimates of p for Leucocytozoon increased linearly during the August sampling period; numbers represent the lowest, median, highest estimates and associated SE. Abbreviations: ad age class adult, juv age class juvenile, MALL mallard, NOPI northern pintail, AGWT American green-winged teal
Fig. 2Estimated prevalence (±95 % CI) of Leucocytozoon parasites infecting five duck species sampled during May – August, 2010, interior Alaska
Fig. 3Estimated prevalence (±95 % CI) of Haemoproteus parasites infecting five duck species sampled during May – August, 2010, interior Alaska
Fig. 4Estimated prevalence (±95 % CI) of Plasmodium parasites infecting five duck species sampled during May – August, 2010, interior Alaska
Fig. 5Co-infection relationships between infection status with Haemoproteus and Leucocytozoon parasites in northern pintails. Panel a depicts estimated probability of infection with Haemoproteus parasites (±95 % CI) relative to Leucocytozoon (Leuc) infection status; panel b depicts estimated probability of infection with Leucocytozoon parasites (±95 % CI) relative to Haemoproteus (Haem) infection status. Estimates were produced from the top approximating genus-specific models in Stage 2 of model selection