| Literature DB >> 27382470 |
S S Killen1, B Adriaenssens1, S Marras2, G Claireaux3, S J Cooke4.
Abstract
Repeatability of behavioural and physiological traits is increasingly a focus for animal researchers, for which fish have become important models. Almost all of this work has been done in the context of evolutionary ecology, with few explicit attempts to apply repeatability and context dependency of trait variation toward understanding conservation-related issues. Here, we review work examining the degree to which repeatability of traits (such as boldness, swimming performance, metabolic rate and stress responsiveness) is context dependent. We review methods for quantifying repeatability (distinguishing between within-context and across-context repeatability) and confounding factors that may be especially problematic when attempting to measure repeatability in wild fish. Environmental factors such temperature, food availability, oxygen availability, hypercapnia, flow regime and pollutants all appear to alter trait repeatability in fishes. This suggests that anthropogenic environmental change could alter evolutionary trajectories by changing which individuals achieve the greatest fitness in a given set of conditions. Gaining a greater understanding of these effects will be crucial for our ability to forecast the effects of gradual environmental change, such as climate change and ocean acidification, the study of which is currently limited by our ability to examine trait changes over relatively short time scales. Also discussed are situations in which recent advances in technologies associated with electronic tags (biotelemetry and biologging) and respirometry will help to facilitate increased quantification of repeatability for physiological and integrative traits, which so far lag behind measures of repeatability of behavioural traits.Entities:
Keywords: Environmental effects; intraclass correlation; personality; phenotypic plasticity; reaction norm; temperature
Year: 2016 PMID: 27382470 PMCID: PMC4922260 DOI: 10.1093/conphys/cow007
Source DB: PubMed Journal: Conserv Physiol ISSN: 2051-1434 Impact factor: 3.079
Figure 1:Using simulated data, we illustrate how plasticity to changing contexts interacts with three different metrics of repeatability discussed in the main text (R, Radj and Rcontext) and with cross-context correlations. Individual specific intercepts and slopes, fitted to simulated data using random regression methods, are presented in the top panels, whereas the bottom panels show R as continuous lines, Radj as dashed lines and Rcontext with red dots. (a) and (e) represent a scenario in which individuals differ in mean traits (intercepts) but show equal increases of trait values with contexts (equal slopes). Given that individual rankings are maintained as contexts change, the cross-context correlation of trait values in context 0 vs. context 1 equals one in this scenario (R 0–1 = 1). Systematic changes in mean trait values across contexts further erode R values compared with Radj. Next, three scenarios are shown that differ in slope–intercept correlations while keeping all other parameters similar. In (b) and (f), individual slopes and intercepts show a strongly positive correlation (0.7), causing curves to fan out with little crossing among individual curves. This results in a gradual increase in Rcontext as context scores increase and a large cross-context correlation between context 0 and 1 (R 0–1 = 0.93). (c) and (g) show a scenario with zero slope–intercept correlation. This increases the incidence of crossing curves, tempers the rise of Rcontext and reduces the cross-context correlation of trait values (R 0–1 = 0.65). (d) and (h) show a scenario with strongly negative (−0.7) correlation between individual intercepts and slopes. In this scenario, the high incidence of curve crossings causes low cross-context correlations (R 0–1 = 0.13) and repeatabilities to reach a minimum in the context where most curves cross. Simulations are based upon a design in which 40 individuals are scored 15 times each across the full contextual gradient from 0 to 1. Parameters left unchanged in the simulated data are population-wide slope and intercepts (β intercept = 7, β context = 2) and between-individual differences in average traits (random intercept variance = 3). Between-individual differences in plasticity and residual error were similar in all panels (random slope variance = 5 and residual variance = 3) except for panels (a) and (e), where both were set to approximate zero. Curves are shown in black for 10 randomly selected individuals to enhance clarity of how each scenario affects crossing of individual curves, whereas remaining curves are plotted in light grey. All simulations and models were fitted using the package lme4 in R (Bates ; R Core Team, 2015). Full code in R for simulations, figures and calculation of context-specific repeatabilities and cross-environmental correlations is given in the supplementary material.
Estimates of within-context and across-context repeatability in studies on fish
| Species | Field/laboratory | Wild/Cultured | Trait | Environmental variable | Time span | Contexta | Repeatability | Method | Reference |
|---|---|---|---|---|---|---|---|---|---|
| Laboratory | Activity | Temperature and days since isolation | 132 days maximum | 24.4°C, 4 days | 0.37 | Single random intercept, random slope model | |||
| 24.4°C, 65 days | 0.38 | ||||||||
| 24.4°C, 132 days | 0.55 | ||||||||
| 26.3°C, 4 days | 0.49 | ||||||||
| 26.3°C, 65 days | 0.3 | ||||||||
| 26.3°C, 132 days | 0.27 | ||||||||
| Field | Wild | Movement | Season | 2 years | Across context | 0.98 | Single random intercept, random slope model | ||
| Summer | 0.13 | ||||||||
| Winter | 0.28 | ||||||||
| Vertical activity | Season | Across context | 0.43 | ||||||
| Summer | 0.56 | ||||||||
| Winter | 0.53 | ||||||||
| Vertical activity | Season | Across context | 0.26 | ||||||
| Summer | 0.69 | ||||||||
| Winter | 0.69 | ||||||||
| Field | Wild | Movement distance | Season | Several months | Across context | 0.78 | Spearman rank correlation | ||
| Maximum distance | Across context | 0.49 | |||||||
| Movement distance | Time | Several hours | Across context | 0.81 | Spearman rank correlation | ||||
| Maximum distance | Across context | 0.62 | |||||||
| Laboratory | Critical swimming speed | Temperature | 4 days | 11°C | 0.86 | Spearman rank correlation | |||
| 22°C | 0.77 | ||||||||
| Laboratory | Cultured | Emergence time | Before and after fasting | 7 days | Across context | 0.12 | Pearson correlation | ||
| Time out from cover | Across context | 0.20 | |||||||
| Activity | Across context | 0.52 | |||||||
| Laboratory | Wild | Position within school | Swimming speed | Several hours | 10–20 cm s−1 | 0.36 | Pearson correlation | ||
| 10–30 cm s−1 | 0.31 | ||||||||
| 20–30 cm s−1 | 0.78 | ||||||||
| Laboratory | Wild | Emergence time | Varying levels of hypoxia | 3 days | Across context | 0.16 | Intraclass correlation coefficient | ||
| Time out from cover | Across context | 0.16 | |||||||
| Activity | Across context | 0.08 | |||||||
| Field | Wild | Migration speed | Flow | Ocean environment | 0.27 | Spearman rank correlation | |||
| Turbulent river | 0.13–0.18 | ||||||||
| Non-turbulent river | 0.40–0.79 | ||||||||
| Field | Wild | Energy density | Spawning migration | Across context | 0.98 | Spearman rank correlation | |||
| Field | Wild | Spawning time | Season | 8 years | Across context | 0.42–0.56 | Intraclass correlation coefficient | ||
| Spawning location | Across context | 0.14–0.16 | |||||||
| Field | Wild | Daily distance travelled | Season | Several months to 2 years | Autumn | 0.31–0.76 | Spearman rank correlation | ||
| Winter | 0.51–0.72 | ||||||||
| Spring | 0.19–0.51 | ||||||||
| Summer | 0.75–0.92 | ||||||||
| Mean daily swimming speed | Autumn | 0.09–0.62 | |||||||
| Winter | 0.65–0.70 | ||||||||
| Spring | 0.25–0.52 | ||||||||
| Summer | 0.55–0.91 | ||||||||
| Laboratory | Wild | Cortisol | Time | 6 days | Across context | 0.43 | Intraclass correlation coefficient | ||
| Field | Wild | Cortisol | Baseline | 1 year | Baseline | 0.06 | Pearson correlation | ||
| Stress induced | 1 year | Stress induced | 0.19 | ||||||
| Laboratory | Sprint swimming speed | With and without fasting | 45 days | Control | 0.21 | Intraclass correlation coefficient | |||
| Fasting | 0.19 | ||||||||
| Compensatory growth | 30 days | Control | 0.51 | ||||||
| Growth compensated | 0.31 | ||||||||
| Field | Wild | Sprint swimming speed | Intermittant periods fasting/feeding | Several weeks | 0.48–0.54 | Spearman rank correlation | |||
| Phosphofructokinase | 0.08–0.57 | ||||||||
| Lactate dehydrogenase | 0.09–0.66 | ||||||||
| Cytochrome | −0.65 | ||||||||
| Nucleoside-diphosphate kinase | 0.16–0.57 | ||||||||
| Hypoxia tolerance | Oil and dispersant exposure | 2 months | Control | 0.57–0.65 | Pearson correlation | ||||
| Oil exposed | 0.71–0.77 | ||||||||
| Oil + dispersant exposed | 0.60–0.71 | ||||||||
| Dispersant exposed | 0.61–0.75 | ||||||||
| Temperature tolerance | Oil and dispersant exposure | Control | 0.35–0.68 | ||||||
| Oil exposed | 0.73 | ||||||||
| Oil + dispersant exposed | 0.77 | ||||||||
| Dispersant exposed | 0.24–0.68 | ||||||||
| Laboratory | Wild | Activity | Exposure to predator odour | 3 weeks | Across context | 0.28 | Binomial generalised linear mixed-effects models | ||
| 1 week | Control | 0.77 | |||||||
| 1 week | Predator odour | <0.14 | |||||||
| Aggression | Exposure to predator odour | 3 weeks | Across context | 0.27 | |||||
| 1 week | Control | 0.07 | |||||||
| 1 week | Predator odour | <0.14 | |||||||
| Boldness | Exposure to predator odour | 3 weeks | Across context | 0.18 | |||||
| 1 week | Control | 0.41 | |||||||
| 1 week | Predator odour | <0.14 | |||||||
| Laboratory | Cultured | Sprint swimming speed | Temperature (acclimation to 12 and then 22°C) | 4 weeks | Across context | 0.43 | Spearman rank correlation | ||
| Laboratory | Wild | Critical swimming speed | Exposure to training | 40–50 days | Across context | 0.35 | Spearman rank correlation | ||
| Sprint swimming speed | Across context | 0.4 | |||||||
| Both | Wild | Boldness | Arena size (small aquaria, large aquaria, field) | 20 min | Across context | Low (exact value not presented) | |||
| Activity | Across context | Low (exact value not presented) | |||||||
| Bite rate | Across context | 0.48 | Pearson correlation | ||||||
| Laboratory | Wild | Latency to emerge | Laboratory vs. field | 30 min | Laboratory | 0.38 | Intraclass correlation coefficient | ||
| Location | Laboratory | 0.54 | |||||||
| Field | Wild | Bite rate | 30 min | Field | 0.64 | ||||
| Activity | Field | 0.69 | |||||||
| Position in water column | Field | 0.52 | |||||||
| Aggression latency | Field | 0.2 | |||||||
| Aggesssion strikes | Field | 0.2 | |||||||
| Bite rate | 3 days | Field | 0.77 | ||||||
| Activity | Field | 0.62 | |||||||
| Position in water column | Field | 0.33 | |||||||
Included are studies that examined trait repeatability within or across multiple environmental contexts or that performed measures using fish in the wild across multiple seasons.