Literature DB >> 27381398

Structural and Mutagenic Analysis of Metallo-β-Lactamase IMP-18.

Takamitsu Furuyama1, Haruka Nonomura2, Yoshikazu Ishii3, Nancy D Hanson4, Akiko Shimizu-Ibuka5.   

Abstract

IMP-type metallo-β-lactamases (MBLs) are exogenous zinc metalloenzymes that hydrolyze a broad range of β-lactams, including carbapenems. Here we report the crystal structure of IMP-18, an MBL cloned from Pseudomonas aeruginosa, at 2.0-Å resolution. The overall structure of IMP-18 resembles that of IMP-1, with an αβ/βα "folded sandwich" configuration, but the loop that covers the active site has a distinct conformation. The relationship between IMP-18's loop conformation and its kinetic properties was investigated by replacing the amino acid residues that can affect the loop conformation (Lys44, Thr50, and Ile69) in IMP-18 with those occupying the corresponding positions in the well-described enzyme IMP-1. The replacement of Thr50 with Pro considerably modified IMP-18's kinetic properties, specifically those pertaining to meropenem, with the kcat/Km value increased by an order of magnitude. The results indicate that this is a key residue that defines the kinetic properties of IMP-type β-lactamases.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 27381398      PMCID: PMC4997881          DOI: 10.1128/AAC.00985-16

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN: 0066-4804            Impact factor:   5.191


  24 in total

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Authors:  M Galleni; J Lamotte-Brasseur; G M Rossolini; J Spencer; O Dideberg; J M Frère
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2.  Analysis of the importance of the metallo-beta-lactamase active site loop in substrate binding and catalysis.

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4.  Probing the role of Asp-120(81) of metallo-beta-lactamase (IMP-1) by site-directed mutagenesis, kinetic studies, and X-ray crystallography.

Authors:  Yoshihiro Yamaguchi; Takahiro Kuroki; Hisami Yasuzawa; Toshihiro Higashi; Wanchun Jin; Akiko Kawanami; Yuriko Yamagata; Yoshichika Arakawa; Masafumi Goto; Hiromasa Kurosaki
Journal:  J Biol Chem       Date:  2005-03-23       Impact factor: 5.157

5.  The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling.

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7.  Purification, crystallization and preliminary X-ray analysis of IMP-18, a class B carbapenemase from Pseudomonas aeruginosa.

Authors:  Takamitsu Furuyama; Yoshikazu Ishii; Norimasa Ohya; Kazuhiro Tateda; Nancy D Hanson; Akiko Shimizu-Ibuka
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-11-29

Review 8.  Metallo-β-lactamases: a last frontier for β-lactams?

Authors:  Giuseppe Cornaglia; Helen Giamarellou; Gian Maria Rossolini
Journal:  Lancet Infect Dis       Date:  2011-05       Impact factor: 25.071

9.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

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10.  Features and development of Coot.

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  4 in total

1.  The Reaction Mechanism of Metallo-β-Lactamases Is Tuned by the Conformation of an Active-Site Mobile Loop.

Authors:  Antonela R Palacios; María F Mojica; Estefanía Giannini; Magdalena A Taracila; Christopher R Bethel; Pedro M Alzari; Lisandro H Otero; Sebastián Klinke; Leticia I Llarrull; Robert A Bonomo; Alejandro J Vila
Journal:  Antimicrob Agents Chemother       Date:  2018-12-21       Impact factor: 5.191

Review 2.  Metallo-β-Lactamase Inhibitors Inspired on Snapshots from the Catalytic Mechanism.

Authors:  Antonella R Palacios; María-Agustina Rossi; Graciela S Mahler; Alejandro J Vila
Journal:  Biomolecules       Date:  2020-06-03

3.  Structure and Molecular Recognition Mechanism of IMP-13 Metallo-β-Lactamase.

Authors:  Charlotte A Softley; Krzysztof M Zak; Mark J Bostock; Roberto Fino; Richard Xu Zhou; Marta Kolonko; Ramona Mejdi-Nitiu; Hannelore Meyer; Michael Sattler; Grzegorz M Popowicz
Journal:  Antimicrob Agents Chemother       Date:  2020-05-21       Impact factor: 5.191

4.  Exploring the Role of L10 Loop in New Delhi Metallo-β-lactamase (NDM-1): Kinetic and Dynamic Studies.

Authors:  Alessandra Piccirilli; Emanuele Criscuolo; Fabrizia Brisdelli; Paola Sandra Mercuri; Sabrina Cherubini; Maria Laura De Sciscio; Mauro Maccarrone; Moreno Galleni; Gianfranco Amicosante; Mariagrazia Perilli
Journal:  Molecules       Date:  2021-09-09       Impact factor: 4.411

  4 in total

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