Literature DB >> 27363608

Determining the Turnover of Glycosphingolipid Species by Stable-Isotope Tracer Lipidomics.

Tore Skotland1, Kim Ekroos2, Simona Kavaliauskiene3, Jonas Bergan4, Dimple Kauhanen5, Tuulia Lintonen5, Kirsten Sandvig3.   

Abstract

In this study, we used water-soluble stable mass isotope precursors to measure the turnover of endogenous ceramide (Cer) and glycosphingolipids (GSLs) in HEp-2 cells. Cells incubated in the presence of [13C-U]glucose showed rapid incorporation of hexose residues with an increased mass of 6Da into GSLs. Different turnover rates of GSL classes and their molecular species were observed. Approximately 30% of the glucosylceramide, 50% of the lactosylceramide, and 50% of the globotriaosylceramide species showed a much slower turnover than the rest. This demonstrates the existence of different lipid pools, where a certain fraction of species survived for a long time in the cells. The species with the shortest N-amidated fatty acyl groups (C16:0 and C18:0) showed a more rapid turnover than those with the longest N-amidated fatty acids (C24:0 and C24:1). Experiments with addition of [13C-U]serine were performed to study de novo synthesis of Cer from serine and palmitoyl-CoA. These experiments revealed that de novo synthesis contributes to a minor extent to the total synthesis of new sphingolipids and showed that there is a more rapid formation of the longest Cer species (C24:0 and C24:1) than of the shortest species (C16:0), that is, the opposite as observed for the GSLs in the experiments with [13C-U]glucose. In conclusion, this FLUX lipidomics experimental approach with the addition of [13C-U]glucose to cells allows us to not only study the total turnover but also permit observations of lipid intermediates and metabolic flow of endogenous GSL species at the molecular lipid level. Copyright Â
© 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  FLUX lipidomics; lipid turnover; mass isotopes; mass spectrometry; sphingolipids

Mesh:

Substances:

Year:  2016        PMID: 27363608     DOI: 10.1016/j.jmb.2016.06.013

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  15 in total

1.  A new brain-penetrant glucosylceramide synthase inhibitor as potential Therapeutics for Gaucher disease.

Authors:  Takahiro Fujii; Yuta Tanaka; Hideyuki Oki; Sho Sato; Sachio Shibata; Takamitsu Maru; Yuta Tanaka; Maiko Tanaka; Tomohiro Onishi
Journal:  J Neurochem       Date:  2021-08-31       Impact factor: 5.546

2.  Metabolic flux analysis of the neural cell glycocalyx reveals differential utilization of monosaccharides.

Authors:  Maurice Wong; Gege Xu; Mariana Barboza; Izumi Maezawa; Lee-Way Jin; Angela Zivkovic; Carlito B Lebrilla
Journal:  Glycobiology       Date:  2020-10-21       Impact factor: 4.313

3.  Different rates of flux through the biosynthetic pathway for long-chain versus very-long-chain sphingolipids.

Authors:  Iris D Zelnik; Giora Volpert; Leena E Viiri; Dimple Kauhanen; Tamar Arazi; Katriina Aalto-Setälä; Reijo Laaksonen; Anthony H Futerman
Journal:  J Lipid Res       Date:  2020-07-10       Impact factor: 5.922

Review 4.  Protection against Shiga Toxins.

Authors:  Simona Kavaliauskiene; Anne Berit Dyve Lingelem; Tore Skotland; Kirsten Sandvig
Journal:  Toxins (Basel)       Date:  2017-02-03       Impact factor: 4.546

5.  Genome-wide association meta-analysis of circulating odd-numbered chain saturated fatty acids: Results from the CHARGE Consortium.

Authors:  Marcia C de Oliveira Otto; Rozenn N Lemaitre; Qi Sun; Irena B King; Jason H Y Wu; Ani Manichaikul; Stephen S Rich; Michael Y Tsai; Y D Chen; Myriam Fornage; Guan Weihua; Stella Aslibekyan; Marguerite R Irvin; Edmond K Kabagambe; Donna K Arnett; Majken K Jensen; Barbara McKnight; Bruce M Psaty; Lyn M Steffen; Caren E Smith; Ulf Risérus; Lars Lind; Frank B Hu; Eric B Rimm; David S Siscovick; Dariush Mozaffarian
Journal:  PLoS One       Date:  2018-05-08       Impact factor: 3.240

6.  Lipidome-wide 13C flux analysis: a novel tool to estimate the turnover of lipids in organisms and cultures.

Authors:  Michael Schlame; Yang Xu; Hediye Erdjument-Bromage; Thomas A Neubert; Mindong Ren
Journal:  J Lipid Res       Date:  2019-11-11       Impact factor: 5.922

Review 7.  Recent advances in the mass spectrometric analysis of glycosphingolipidome - A review.

Authors:  Rodell C Barrientos; Qibin Zhang
Journal:  Anal Chim Acta       Date:  2020-05-24       Impact factor: 6.911

8.  Cellular effects of fluorodeoxyglucose: Global changes in the lipidome and alteration in intracellular transport.

Authors:  Simona Kavaliauskiene; Maria Lyngaas Torgersen; Anne Berit Dyve Lingelem; Tove Irene Klokk; Tuulia Lintonen; Helena Simolin; Kim Ekroos; Tore Skotland; Kirsten Sandvig
Journal:  Oncotarget       Date:  2016-11-29

9.  Intact glycosphingolipidomic analysis of the cell membrane during differentiation yields extensive glycan and lipid changes.

Authors:  Maurice Wong; Gege Xu; Dayoung Park; Mariana Barboza; Carlito B Lebrilla
Journal:  Sci Rep       Date:  2018-07-20       Impact factor: 4.379

10.  Multi-omics systems toxicology study of mouse lung assessing the effects of aerosols from two heat-not-burn tobacco products and cigarette smoke.

Authors:  Bjoern Titz; Justyna Szostak; Alain Sewer; Blaine Phillips; Catherine Nury; Thomas Schneider; Sophie Dijon; Oksana Lavrynenko; Ashraf Elamin; Emmanuel Guedj; Ee Tsin Wong; Stefan Lebrun; Grégory Vuillaume; Athanasios Kondylis; Sylvain Gubian; Stephane Cano; Patrice Leroy; Brian Keppler; Nikolai V Ivanov; Patrick Vanscheeuwijck; Florian Martin; Manuel C Peitsch; Julia Hoeng
Journal:  Comput Struct Biotechnol J       Date:  2020-04-25       Impact factor: 7.271

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